Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_16_485
Category : putative
Original description : Putative SSD (sterol-sensing) domain-containing protein
Sequence : MYGSCGRKGFFGGELPCPDNTLARESSDPLFLSTLASVCGPTFSPTTCCNQGQLDTLSSSLAQAEPLIATCPACR
NNFRRFFCEFTCSPDQSLFMSVTETQNLTTGGMTKEAVKSVDVEIGQEFGEGFFGSCKDVKFGATNGFAMDLLGG
GAKNYLAFLRYLGQERALGSPFQINFPPPSAPPPDRLALSPSFDNSTIIPFNNIPLSCSSPELNARCACPDCPSV
CASLPPIASPAELAAHKCKVGKMSCFSFALTIIYAVALVGFVLGVAVQEALSRKGKKSAGGPLAAGQNRLSWQWS
SRDGSGYDRVPMEDPLLVGDLDDSATPIGNVAGVLSSRNTPSSGTNSLVGATSTSQIYDGEDARGRRPPSGSSGI
TSSNSPDTSRHRLSRGASLLDPSSDPTENPFLQPRTYPLNTFLSTSFYKLGLFCASRPYLTLAAGFAFCGVVNLG
WGRFEVEKDPVKLWVARGSESERAKNDFDDAFGPFYRTEQIFVSVAPEARKAAADEIVSDRWEPVDEPVLTWGRL
EWWASVEASIRDLKSSPNNYSLADVCFSPQTDPLPPSDASACVVQSMMGYFGDSLESVNSDSWATNLNECATTPA
ACLPGSGMLMNPKLVLGGLPARAKDDNTPLRADQARALVITYVVRNSLDPTVVARAEEWESTLQAFLVELASPSG
VARQEFGLELAFSTGVSLEEELNKSTNTDVPVVALSYIVMFFYVSINLGSSGAGLVKSVGRGLLLLGLGVVGLAR
MVPVPKRFGGQGLGRARAGSVSLSLAGSTSGMGAYFRRQLLVDSKFLLGLWGIIIVLLSVSTSVALFSALGIKVT
LIIAEVIPFLVLAIGVDNVFILSHELDQQNARAYATASRHGPLFGADDGQEEDDVDSLPSAEERVARALARMGPS
ILLSASCETVAFGLGALVGMPAVRNFAIYAAGAVVVNALLQVTIFVSAMAVDLRRVESNRIDCFPCFKLPPASSL
DLGATVTEGYIARFIRTVYAPTLLKKPVKYFVVALFGGMFVLSWIGARHIELGLDQRLALPASSYLANYFDALDT
FLDVGPPVYFVSRDINVTARANQQRLCGRFSTCDELSLANVLEAERKRPDSSFIAEPPAVWIDDFFQWLNPLLED
CCRVKKADPSVFCTPDDADFRCRPCFEDAEPAWNITMEGLPEGEDFMWYLNQWLVSPTDEACPLGGKAAYSSALS
VDDSSVKLSHFRTYHTPLKTQADFINAMAAAQRVAQDLSQRTGADVFPYSLFYVFFDQYSHIIATTREVLTLALL
SVFLVTSLLLGSWRTGGVVVFTVFLSVVGVMGVMGAWGISLNAISLVNLVISVGISLEFTSHIARAFMGAAGGGL
PHSHPAGAKDRDERAWTALVDVGSSVFSGITLTKLIGISVLALTRSKLLEVYFFRMWLALIVSGALHGLVFLPVA
LSFQGGQGYALDADDAGWIGSTVGSRYEHEGRPFLADDDDDDESDGDRF
KEGG Ontology ID : K12385
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF16414 Niemann-Pick C1 N terminus 1-250 N/A
Pfam PF02460 Patched family 1194-1427 GO:0016021
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain 669-951 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_485,PF02460,791-1052 AlphaFold2 82.34 Putative SSD (sterol-sensing) domain-containing protein LAN_16_485,PF02460,791-1052
LAN_16_485,PF02460,1194-1427 FunMod -0.12181 Putative SSD (sterol-sensing) domain-containing protein LAN_16_485,PF02460,1194-1427
LAN_16_485,PF16414,1-250 FunMod -0.44195 Putative SSD (sterol-sensing) domain-containing protein LAN_16_485,PF16414,1-250
Ligand binding site information :
Structure ID Residues
LAN_16_485,PF16414,1-250 1,14,16,162,169,171,172,174,176,53,56,57,60,82,85,86
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_485,PF02460,791-1052 200,204,205,208,210,211,212,213,214,215,216,217,218,220,221,222,223,224,225,226,227,228,229,230,231,232,233,234,235,236,237,238,239
LAN_16_485,PF02460,1194-1427 1208,1211,1212,1215,1228,1248,1249,1250,1251,1253,1254,1255,1256,1257,1258,1259,1260,1262,1263,1314,1315,1316,1322,1396,1397,1398,1399,1400,1401,1402

Footer