LAN_16_474

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Protein ID	:	LAN_16_474
Category	:	putative
Original description	:	Putative vacuolar protein sorting-associated protein
Sequence	:	MCVDNLNTGQLNIGIWSGDVKLKNLRLKKEALDKFRLPVDVIEGYLGDLTLSIPWSNLKGKPVRVLVENVYLLAV PTDSSKATPEEDEARGQAAKQEKLENAEMMTSQPSAGMSEEDEKKNESFTASLITKIVDNLQIEVRNIHIRYEDK LSVPGHPFSAGLTLSGFSAVSTDEFWHPTFITSSKNGIHKLAKLESLAVYFDTDSESLAGYPIDEAIVKFTDLIA KEGHTPEHQFVLKPVSGEGRLVMNSKVDNTTPKTDAELLFKELGFVIDADQYRDVLSMVDLFHFYIRQREYRPFR PPQKEIEENRERALWKFAIKAIRTEVHDKNKRWSWGYFAERRDDRKEYVRIYKAKSRLEIAPEESVDLADLEKKL GYKDIRFYRSIARSEMRKEHATARHDEVVAPAAPASTGWLGWVGWGATKPAAHEEHLHGDGQPGLNEEQRKELYK AIDWDEEDAVATVDLPKEAMMLRVKAKLETGSFALRTDPHGTNRDLISLNFDAFQLDLVQRPENFDAVLALGGLR VFDGTCEGSVHQQIVRVKEAKIKERALAISKAIPLDPEDREADDDEGQYDEIEHEVDTALGVQDPFFSLKFEHNP LDGRADNALAVRLRHMEIIYHRGYVEAIVAFFKPPESQLESVGALIDVASSTLEGITKETRAGLEYALAQHKTVD LHLDLNAPIIIVPENMTLQNCQHIVLDAGHISVRSDLADKAAIGAVKAKENQEYSEEDYQRLESLMYDKFYVKLE SAQLLMGPSLQVCLDALDDADAGHGSAGGELHILERTSLTFLAQNCILAQAPNLTRFKVSGSLPLLQVNLSDRKY KSMMRMIDVAIPKFGDDKPETIRPPVVPRSTSTFGKSRAAAAEAAMEDEVYHLDREEEEGKDEEGGKDEFFDTED IADGSSINLHQKTFEFAFNIDRVQASIFRSNANPIKPDRLLVNAVLEGFQFEFGLRPFDMSVDILLRSLYIEDKM VEEQTELRHLVTSGGEQGQDLVRIRYQGVQKASPEFMTVHEGIDKTVDVELSTIKVVVTRGSILILFDWVMTTFT DGPGANYPSPSPDTPLGEELPLVPEVSDKLRVKVKLTSIIAVLNEDGFRLATLALSAADVSVMLRAPTMRVAARL GNLTFVDDFSAGAPKEMLSIQGDEFADFQYETYDPNHLTMYPGHDTLVYLRTGSLKFTFNEEPVNRILIFFSKFG RMKAAYDASSQAAARLAAEAAAQHPNEVQDKPSKMHYDILVRTPIVVFPRGQLDSDDLIIANLGEISLSNKFEVT ENQVVTKIQAGLREVRLTSTIHHEGEPYSLQILNDVHIGVEVVLTQNVDADKDLPATATQIVASMSDVKMNLSQT QYGFVIALLQTIPRAFDMSENDDEDDETSLEPILISPSSPSTNPSDEPVVDLLPELSAVAKAPDGKVVQLKSSLE LTFAVGTIYLELFTAAALSPESLKDSSLARFSLNETGVKYKMLTNGAMEAEVVIRSFTVHDTRTSRQTKFREIIP ATSHSGHQFMINFTQSGGTDKSAFANVTIDSPKVIFSLDPLFALLDYFTSAFPKVEAVELSSEEHEDQQVAEASS PSGSTFAFRVNVVSPTIIMLDNPERSDSEAVILSISQVQMAQQGTLALTVSKIGMFLCKMDKPKDNIRFLDNFDI SLSLDSRADASHQITSIDIGIQPLVLRVSFRDILLVNSIVNRAIEMSNRSAASPPPPPPSRPQLQPTTSGKRSRT DPSRRSLSRSRRKSSVGQLQAQVIISKETLRATVDGFQLILIGDTHDLPMIDVKAGKFVAKVNDWSSDLKASVTI MPFINYFNLRVSHWEPLMDPWEFAIHVSKSVATGLLAITLSSRKRLELNITSTFIELALTTSALLGREGDKIFTR ARGANAPFLIKNRTGYPLSLWNEAAEKVDGAASERLEDGADVHWRFDDWRTVRENVSVTSHNSLTLLFEGMTWER LRHISVDREGEHIYALRPKIDKVTHRLLCEVKLVENVKVVTFRSTFQVENRSLVTAEMVIVDANGKRASQIYKIP PGEDCAVPILAAYDSRIKLRPDPGFGYVWSTESFHWKDLVKRPTRAIVCKSQKEAAFRFQAYAVHDKSDPLIRVY PKISLRLRAPVEIQNLLPHDIRYRVFDKNLEHNWTSFLRNGGVSPIHVAELSHLLLLSVEAQDTVFQRSEFAIIN TDNPEDLPVETDLVLQDKEGLKLNLRVHYQKHADSGGAFRVQVYSPYILINKTGCDFALKTKSFMSSAKNVAGQE VFSGDHKRRGPEPFMFSFPTTDGRNRVLLRIGDSAWSKPLSFETVEMETDVIIPSAAGTEEIHIGLKVTEGLGDY KLTKVVTLYPRFIVKNQTGEEIQFREVGSDTAVTLAADERRPLEFLRAGIQPQLVLSFPGSKEWSAPFKIQDVGA NFVRVRHGLEETLVRTDVLLEGPCIFVRLELEKGSWPFLLRNDSDFPITFCQADPEDSSSRGSSKRYLLEAQTKM PYAWDLPAASNRQLKIVVGGRERIVNVLEIGSQIPFRFPYGTGNRVLSIDVRAEGPTQAIRFSNYTEADSVFKIQ RRNTETLSRQDSVASSREGVFEAVDVDVVTTFSFGISLEGIGISIVNKKMQELVYASFRGLTAKYSDSTTNVAYD VGIKWIQVDNQLFGGLYPILLYPSVIPKDGKELEIHPSLQASVIVLKDEAHGVTYFKYASVLIQEMTIEVDEDFL FALLDFAKFSGATGQEEAPSKLTDEPAEIVEPKGSTGGGDVYFEVLHLQPIQLDLSFMRTDRVNVDQKLNTRNPF FFFINALTMALGNVNDAPVRLNALVIENVRLSLPVLQERLTLHYGQEFFGQLYRVLGSADFLGNPVGLFTNVSSG VADFFIQPYDSVMMNGNKDLGIGIARGAGSLAKKTVFGLSDSVAKFTGSIGKGLSAATLDKQYQSQRRMRQFRNK PKHALYGVTAGATSFVTSVASGFEGLATKPLEGAEAGGALGFFKGVGKGLVGVVTKPAVGLFDLATNVTEGIRNT TTVFDQSSIDRVRLPRFTASDGILRPYQEREALGQNWLKNVETGKYFDETYVAHLDIPSSEDSLVVLLTTTRILL VKILKLKVGWDVPLSDLQTISLEPTGITLVLRGGVSGPIPRYP
KEGG Ontology ID	:	K19525
Disordered region length	:
Disordered region residues	:	N/A
Disordered binding region residues length	:
Disordered binding region residues	:	N/A

Domain information

:

Database	Database ID	Domain description	Range covered	Gene ontology
Pfam	PF12624	N-terminal region of Chorein or VPS13	3-100	N/A
Pfam	PF16908	Vacuolar sorting-associated protein 13, N-terminal	124-353	N/A
Pfam	PF16910	Repeating coiled region of VPS13	596-837	N/A
Pfam	PF06650	SHR-binding domain of vacuolar-sorting associated protein 13	2214-2485	N/A
Pfam	PF16909	Vacuolar-sorting-associated 13 protein C-terminal	2740-2914	N/A

Structure ID	Modelling platform	Score (NDOPE/pLDDT)	Molprobity score	Current description	Structure file
Structure information	:
LAN_16_474,PF06650,2214-2485	ColabFold	90.27	2.218	SHR-binding domain of vacuolar-sorting associated protein 13	LAN_16_474,PF06650,2214-2485
LAN_16_474,PF12624,3-100	ColabFold	78.76	2.47	N-terminal region of Chorein or VPS13	LAN_16_474,PF12624,3-100
LAN_16_474,PF16908,124-353	ColabFold	89.02	1.623	Vacuolar sorting-associated protein 13, N-terminal	LAN_16_474,PF16908,124-353
LAN_16_474,PF16909,2740-2914	ColabFold	79.85	2.518	Vacuolar-sorting-associated 13 protein C-terminal	LAN_16_474,PF16909,2740-2914
LAN_16_474,PF16910,596-837	ColabFold	84.99	1.972	Repeating coiled region of VPS13	LAN_16_474,PF16910,596-837

Ligand binding site information	:	N/A

Structure ID	Protein-protein interaction site residues
Protein-protein interaction site information	:
LAN_16_474,PF12624,3-100	4,6,7,9,10,11,12,13,14,15,17,47,49,51,53,54,55,56,57,60,61,62,63,64,65
LAN_16_474,PF16908,124-353	1,5,154,161,164,199,202,203,206,207,209,210,212,215,218,219,221,222,223,225,226,228,229,230
LAN_16_474,PF16910,596-837	22,23,24,25,26,27,28,29,30,31,32,33,35,36,37,90,92,94,96,240,242