Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_325
Category : putative
Original description : Putative XPG/RAD2 endonuclease 
Sequence : MGIRAFDYWLSERGLVKDVPLSALAGTRIGIDAAHYLRRLLAMRDPATSDTFVAAVGGAPLALTGQIEKDLKSLQ
SAGVKPVFVFSGITPLEKERPFLAEDPRTWRRAQAWEHYEQGRVPQAQAEFGNSNPVVPQDVMRIVLRIFKQRSV
EFVVAPYLAWAQLVYLERHERAYVHSIYGSNELFMFDGIDRIILNIDFASSTISFASKNAILTDMGVSSDQFLDL
SIIAGFENSPSFPGLDPREFLFRNAVDLVKARGTGVAAVMAFKDYPPVYTSNYIDQFARARCMIKFSLVLVAQEG
RVLPLPLVVPPPSSSPSLVVTAADIPSDLGDIFSPHFPDEVYYQLFRGLVGPQIINALASGHFVEPTPLCGGTPE
CVALALVSSVLHPVWAKKQVAAIYYFDPSRDYGIPHSSPGTSAFIEGVSKWNVDVRHVENELRRQTSSTIDLSLC
LGGTSTAGLAQKTIVPRNSEQLLDKKDEIVANTLWRFLELRAFLTSAHQHTPHAQALYIAMRSSKVNDKFQEALY
LALELLRSGALHNGRIGNRAYSGGPNFQGTEDDKRSMLLVMRVLSIVPLSFNPGPWSGPLSRELLVFNSFLRVTS
RSMRSLVESVALNLLLRSDARRSREDYVDISLSLPFQTDTNTGMGILFKAFGDTVCHMAGGVDVVTRAGAGTTGA
SVEEQKVVGAAKEQTLSLLDEAFPNVKNVTAELQRGLRFWQVMMIAVRTLRQSTAGSAITPELVHQFEAADAWLK
PFAV
KEGG Ontology ID : N/A
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd09902 H3TH_MKT1 220-295 N/A
Pfam PF12247 Temperature dependent protein affecting M2 dsRNA replication 326-401 N/A
Pfam PF12246 Temperature dependent protein affecting M2 dsRNA replication 486-750 N/A
PRINTS PR00853 Xeroderma pigmentosum group G/yeast RAD superfamily signature 26-40 N/A
PRINTS PR00853 Xeroderma pigmentosum group G/yeast RAD superfamily signature 81-100 N/A
PRINTS PR00853 Xeroderma pigmentosum group G/yeast RAD superfamily signature 145-162 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_325,PF00752,1-94 ColabFold 86.25 2.814 XPG N-terminal domain LAN_16_325,PF00752,1-94
LAN_16_325,PF12246,486-750 ColabFold 91.86 1.931 Temperature dependent protein affecting M2 dsRNA replication LAN_16_325,PF12246,486-750
LAN_16_325,PF12247,326-401 ColabFold 82.69 2.906 Temperature dependent protein affecting M2 dsRNA replication LAN_16_325,PF12247,326-401
Ligand binding site information :
Structure ID Residues
LAN_16_325,PF12246,486-750 163,166,167,170,180,202,206,223,224,227,263,264,265
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_325,PF12246,486-750 1,2,3,4,5,6,7,9,11,13,14,15,20,22,23,26,117,120,121,122,123,124,125,126,127,128,129,130,131,132,133,137,138,142,143,144,145,149
LAN_16_325,PF12247,326-401 31,37,39,41,42,43,44,45,46,47,48,49,50,51,52,70,71,72,73,74,75,76

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