Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_244
Category : putative
Original description : Putative valyl-tRNA synthetase, mitochondrial
Sequence : MASSAEAAAPAAAAPANPALPTDPPSKSSLRKLEKEAALAAKKELKKKIGGGAPPAKGEGKKREKPVAVVVEELP
FIEVQAGEKKDLTNPMAAGYNPTDVERDWYSWWRTCSYFIPAIPSANPSEHSHFDAEPNVLPRLDSGDLDWSKVD
KERTFVIPAPPPNVTGKLHIGHALAFGLQDTLIRWHRMKGFTTLFVPGFDHAGISTQSVVEKRLAKAEGLSRHDL
GREKFLERCMAWKEEYQQGITGQIERLGVSCDWDRVAFTMNEDLSKAVAETFVRLHDDGIIYRANRLVNWCVQMN
TTLSNLEVDQKVLTGRTLLTVPGYLPTERFEFGVITSFIYKIEGSDEQIIVATTRPETMLGDTGIAVNPKDPRYT
HLHGKFALHPFLDRRIPIITDEIADMEFGTGAVKMTPAHDPNDYEVGMRHKLEFINILNDDGTLNANAGPEFQGM
KRFHARNEVVKALKAKGLYVGWADNEMSIPICSKSGDIIESVMKPQWWVATKTLADEAIKRTRAGELLIRPAQSE
AEWYRWLRDNQDWCISRQLWWGHRAPAYFARMEGAEQDRLSGEFWVSGRNHEEAQARAEVKFPGKKFVLEQDEDV
LDTWFSSGLWPFSIQGWPAQTNDLKAFYPANVLETGWDILFFWVARMVMLGVHLTGKVPFNEVFCHAMIRDAHGR
KMSKSLGNVIDPIDVIEGASLDVLHAQLRAGNLAEKEIELAEKGQKKDFEKGIPQCGTDALRFALANYSAAGRDI
NLKIDHVHGYRKFCNKLWNATKFAMLKLDGDFVPAPSEKPTGDESLVERWILQKLNHATVIIDKALNERNFMAAT
AEAYRFWLYDICDVYIEAIKLVTDPSAPAVARRSAQNTLYTVLDNGMRLLHPFMPFVTEELWQRLPRRPTNPTKT
IMLARYPEFSDAREFAQEEKDFETAFSGVKAVRGLASGYGLNSKLQVFFLARNPELASSLKSSSETLSVLIKGCT
ALTVVENDSDIPAGCVSENISSDLAIHLLLKGVIDADAEISKAEKKRAFAQAAADKLKTGAAAPDYETKKPEAAR
IKDAEKMRDLDVEITSLTTSIEGLLKLK
KEGG Ontology ID : K01873
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd07962 Anticodon_Ia_Val 752-890 N/A
FunFam 3.90.740.10-FF-000008 Valine--tRNA ligase, mitochondrial 334-369 N/A
PRINTS PR00986 Valyl-tRNA synthetase signature 155-166 GO:0000166, GO:0004832, GO:0005524, GO:0006438
PRINTS PR00986 Valyl-tRNA synthetase signature 370-385 GO:0000166, GO:0004832, GO:0005524, GO:0006438
PRINTS PR00986 Valyl-tRNA synthetase signature 484-497 GO:0000166, GO:0004832, GO:0005524, GO:0006438
PRINTS PR00986 Valyl-tRNA synthetase signature 597-618 GO:0000166, GO:0004832, GO:0005524, GO:0006438
PRINTS PR00986 Valyl-tRNA synthetase signature 628-646 GO:0000166, GO:0004832, GO:0005524, GO:0006438
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_244,3.40.50.620-FF-000020,93-119 AlphaFold2 81.32 Putative valyl-tRNA synthetase, mitochondrial LAN_16_244,3.40.50.620-FF-000020,93-119
LAN_16_244,PF00133,150-752 AlphaFold2 93.84 Putative valyl-tRNA synthetase, mitochondrial LAN_16_244,PF00133,150-752
LAN_16_244,PF08264,798-946 AlphaFold2 92.29 Putative valyl-tRNA synthetase, mitochondrial LAN_16_244,PF08264,798-946
Ligand binding site information :
Structure ID Residues
LAN_16_244,PF00133,150-752 11,12,13,14,157,158,16,20,22,23,26,27,30,335,393,453,454,455,458,486,487,489,490,494,51,517,519,520,527,528,529,53,530,54,
55,56
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_244,3.40.50.620-FF-000020,93-119 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27
LAN_16_244,PF08264,798-946 19,24,25,28,29,32,35,36,37,76,79,80,81,82,83,84,85,87,89,105,109

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