Glaciozyma antarctica protein structure database

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Protein ID : LAN_16_186
Category : putative
Original description : Putative DNA polymerase delta catalytic subunit
Sequence : MSLSDEQASKKRRLSPPAPAPLADAKGTAGAEELPDEEHAAPPSSAAGAHAKPLPPLFSSQGPSQAKGKGRAQDD
DKEGFESVLARLQEGATSDSDKQEWGRPALPKLDVTKEALVFQQIDIEEYVPPGKGPQIRAFGVTQAGHSVLLHI
SGFLPYFWIAAPRDFANADCAPLLEHLNGSLFSGTRPVHSITVANKRSLWGYKGDAVSPFIKITVGDLKAYPKVR
GAFERGEVSFRSLFDGSALMTFESNIAYTLRFMIDHHIVGMNWLELPKGTYSLRTGRDKISNCQLEVDCEHHTLI
SHAPDGDWSRVAPLRILSFDIECAGRKGIFPEADKDPVIQIASMVTRQGETKPFIRNVFTLNTCSPIVGTDVIDF
KNEADLLVKWRDFVEEVDPDLIIGYNISQFDLPYLVDRAKALKASHFPYFGRLKGVKTEVKDTHFSSKAYGNRDS
KETSIDGRLQLDILQVMQRDYKLRSYTLNSVCAHFLGEQKEDVHHSIITDLQNGTAESRRRLAVYCLKDAYLPQR
IMDKLMCFINYIEMARVTGIPFNYLLSRGQQIKVISQLYRKALETGYVVPALKTEGSDEQYEGATVIEPEKGYYD
VPIATLDFASLYPSIMQAHNLCYTTLLDARIAQTLGLVKDVDYVVTPNNDLFVTSSRRRGLLPIILEDLLSARKR
ARAELKNEKDPFKRAVLDGRQLALKISANSVYGFTGATVGKLPCLPISMSVTAYGREMIEQTKQEVQGKYNTANG
YEHDATVIYGDTDSVMVRFGCPDLVTAMQLGAEAAEFVTTKFVAPIKLEFEKVYFPYLLISKKRYAGLYWTKPDK
WDKMDTKGIETVRRDNCRLVVTVIETCLRKMLIERDVKGAEEYTKQTISDLLQNRVDLSQLVITKALAKSGEARR
ATPFEFSFTPILADYQNKQAHVELAERMRKRDAGSAPALGDRVAYVIIKGTKDARAYEKSEDPLYVLENNIPIDT
KYYLENQLSKPLMRIFEPILGGEGELAAIGRPHANSLDRGANRWRSHEVCRSHRHLPRLQDPAQAWIPQQRRLRQ
LPTSNCRATREASESSCLRLAPQSAHDRSPSFKSRLELRRLSRDCGPSASGAKARCTRYVSLPVLATSALTPSPQ
DVLCTSKDCPIFYMRKKAQKDVAESVTQLERFDGSW
KEGG Ontology ID : K02327
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 3.30.420.10-FF-000004 DNA polymerase 313-531 N/A
Gene3D 1.10.132.60 DNA polymerase family B, C-terminal domain 833-1003 N/A
Gene3D 2.40.50.730 G3DSA:2.40.50.730 110-171 N/A
Gene3D 2.40.50.730 G3DSA:2.40.50.730 252-312 N/A
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 603-616 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 696-708 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 757-765 GO:0000166, GO:0003676, GO:0003887
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_16_186,1.10.132.60-FF-000001,833-1004 FunMod -0.7282 Putative DNA polymerase delta catalytic subuni LAN_16_186,1.10.132.60-FF-000001,833-1004
LAN_16_186,1.10.287.690-FF-000001,660-712 FunMod -0.61512 Putative DNA polymerase delta catalytic subuni LAN_16_186,1.10.287.690-FF-000001,660-712
LAN_16_186,3.30.420.10-FF-000004,313-531 FunMod -1.36715 Putative DNA polymerase delta catalytic subuni LAN_16_186,3.30.420.10-FF-000004,313-531
Ligand binding site information :
Structure ID Residues
LAN_16_186,3.30.420.10-FF-000004,313-531 320,321,322,323,325,326,327,330,331,400,401,405,477,478,479,490,491,498,515,519,523
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_16_186,1.10.132.60-FF-000001,833-1004 833,834,837,838,840,899,900,901,902,903,904,905,906,907,908,909,910,911,912
LAN_16_186,1.10.287.690-FF-000001,660-712 660,661,662,663,664,665,666,667,669,670,700,701,702,704,705,706,707,708,709,710,711,712
LAN_16_186,3.30.420.10-FF-000004,313-531 465,466,468,469,470,471,475,478,480,483,484,485,486,487,488,489,493,494,495,514,518,521,525,530,531

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