Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_15_307
Category : putative
Original description : Putative DNA-directed RNA polymerase, mitochondrial
Sequence : MLRTQHLLRARPLPRLSLPCSCRFASTATQASNNAPLATSLPSSPPPPEPLRRTRSPLYTVAPLPPLPPPLPVDA
AGTTTFTPSSISHQNSSVAHEQLAVLNACLASGDITRAEEVAKRIKSSWAGSAKPSTAKLSAMLPSRVHADFLRA
YLSSSLVRKTPTLSNGDTPSANRAKLVHKAWAYFDSLAGEQWESMVGKQKVNAAIDSSVVAVMMKGLVASGEATY
HPSSLTDPDNWLRPITHLLPYLTSYRISLLDVLRDPVFDIELPSYLGKVERLDVLDAIEKTAAGRSGWEEWEGTV
KRVREIVQSDKEGREAFKKAEVAELDPTRSKDDVNISLQTLRTNLSTLGMPGSIEVISPTSRQRLLEESSYDAAR
QLYIHELEELAKVGKDKERGMQSNWLQGVMFDWMRKLESKLCEDAAQTGKQSPWGKDADIEPFLRLLTPDKMALI
TIVELLRLCGGGGVSDGMKAARAILHIGKSIENEYHAEVLKAGFPNKEFQRELERVTESGMIGEDGETAPRNAER
SLDIMWRREMAKREKEGDTSWRPAWSQGIRAKVGSILVTALMEVAEVERSMRHPVTNELITETQPAFSHAYQYVR
GLKLGIIKVNPVVAERMDQDPLRITLHPRFLPMVVQPKPWLAWDSGSYLVHSTQVMRTKDSDEQVQHLMQASDAN
TLDEIFTGLDVLGGLAWKINRPVFDVVSAVWNTGEPLADIPAKDSLTRPIEAEKPENLDTDPRAKDTYRHRIRKA
LQERRASHSNRCDVNYKLEIGRAFLDEKFYFPHNLDFRGRAYPIPPNLSHIGNDMCRGILRFAEAKPLGERGLRW
LKIHMANMTGYDKASFDEREAYTMEHLEEIYDSADNPLDGKRWWLKAEDPWQCLATCFEVANALRSPNPVEYECS
LPIHQDGTCNGLQHYAALGGDLKGAHQVNLDIGDRPADVYSGVAAMANEVIAREVLEGNQYAKLLEGKVTRKVVK
QTVMTTVYGVTFIGAKKQIEKQLKERGDIPPEHLYMCSLFLGRIVLDSIGDVFKGATAIQTWLNRSARLIAKSIP
PGRIEAALQAEEPGRKKKKKVQPGLSRIPKEQMTSVIWTTPLGLPVVQPYRKPKKKQVQTALQTVFIIDPSIPTE
VDARAQATAFPPNFIHSLDATHMMMTALACKDKIAFASVHDSYWTHACSVDEMSVLLRDTFIELHSQDILGKLRQ
EFIQRYAGHVVPVSKVPAGISYTTKAGDEVETRLADADAAAEASAEILSELEEEDGDASEPLFATPKTKGRPKVV
KRAPISGAEEDEDADPTSPDSMGKFWKGSSSKSVGSKLVFLADILPPVPAKGDFDLERIRNSLYFFS
KEGG Ontology ID : K10908
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.10.287.280-FF-000001 DNA-directed RNA polymerase 816-892 N/A
Pfam PF14700 DNA-directed RNA polymerase N-terminal 362-688 N/A
Gene3D 1.10.287.260 G3DSA:1.10.287.260 690-777 GO:0003899
ProSitePatterns PS00900 Bacteriophage-type RNA polymerase family active site signature 1. 902-913 GO:0003677, GO:0003899, GO:0006351
ProSitePatterns PS00489 Bacteriophage-type RNA polymerase family active site signature 2. 969-983 GO:0003677, GO:0003899, GO:0006351
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_15_307,PF00940,816-1342 FunMod -1.93816 2.821 DNA-dependent RNA polymerase LAN_15_307,PF00940,816-1342
LAN_15_307,PF14700,362-688 ColabFold 79.58 2.816 DNA-directed RNA polymerase N-terminal LAN_15_307,PF14700,362-688
Ligand binding site information :
Structure ID Residues
LAN_15_307,PF14700,362-688 10,115,119,122,123,126,13,130,135,138,139,142,146,161,162,163,166,266,267,268,289,290,6,7,8,9,93,96
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_15_307,PF14700,362-688 5,262,265,266,268,269,270,271,272,273,274,275,276,277,279,286,287,288,289,290,326,327

Footer