Glaciozyma antarctica protein structure database

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Protein ID : LAN_14_330
Category : putative
Original description : Putative type II topoisomerase family protein
Sequence : MSSDDSGDQFDFEDNDSGSDAYEVEKPKKPQPVRTPADALPLSPLHALERPSASPSMHHSRLPPNPRPPPKPKAA
PKPKAAPKAAAKKKAAVLEEHVSNGTESDEDVVMADEDEDEAMEMAGPSKAAAKTGKSKSASETYVKLSQLEHVL
KRPDTYIGSVEPITQPMWVFDEAAKSLVFRAITFVPGLYKIVDEILVNAADNKVRDANMKNLKVTIDVDNKTISV
YNDGKGIPIEMHATEGIWIPELIFGQLLTSSNYDDEEAKVTGGRNGYGAKLANIYSTEFIVETACSSNGGKIYKQ
VFSDNMGKKGKPKITDQKKEKLEDWTKITFTPDLTRFNMTEFDADTVSLLQKRVYDMAGVTKGVSVSLNGKKIAL
SGRKDGNFKAYVEMYTSGANEVAGTGAKKAGANDDLVGADVGGVKTILYERFGERWEVAFAVSDGQFQQVSFCNS
IATTKGGTHVNYVADQIVSGIVDLVKKKNKAAPVKPFQVKNHLSIFVNCLIANPAFDSQTKENMTLGVKKFGSTC
KLTEEFLKKVAKSGVVDNVLNWAKFKQDQLLKKTDGHKRSRITGLVKLEDANNAGTKLGSKCTLILTEGDSAKAL
AVSGLAVVGRDNFGVFPLRGKLLNVREATGKALLENVEIQAIKQILGLQQGKVYTNVDSLRYGSLMIMADQDHDG
SHIKGLVINFLDYWFPSLLKLPNFLLEFITPIVKVTKGKKSESFFTIPEYETWKEENRDGEGWKIKYFKGLGTST
ALDAKTYFGDMVHHRLPFRPSTQDDRDLIDMAFNKKKADNRKEWLRGFVPGTYIDHSVVPVPLCDFINKELILFS
MADNIRSIPSMIDGFKPGQRKVLFACFKKKMKEEIKVAQLAGYVSEHSAYHHGEQSLAGTIVNLAQDFVGSNNIH
VLDPNGQFGTRLQGGKDAASARYIFTQVSLITRTLFQVADDNVLDYLTDDGQNIEPFWYMPILPMVLVNGSDGIG
TGWSSTVPNYNPSDIVANLKRKMADEELEPMHPWYRGFRGTIEKTDKDGYKCSGIIERIDDNTVEITELPIRMWT
QTFKESLEAWVTGSEKQVALVKDYKEYHTDTTVHFVISLTDKGKEAIEKDGLEKTFKITSKLNISNMVCFDPAGK
VKKYASPEEVLCDFFDVRMDYYHKRKAFLVDQLTTAHDRLSNQARFIQMIISKQLVIANRKRSAIVAELREKDFR
PFPKSAKAHVAADPDDDGAGEDDAGADSDFDYLLGMALYSLTAEKVAKLLGERDAKEEELNTLLELSAQDLWVRD
LDSFSLQWNELLEADIVAKNKSLRAAKGKGKGKSKKRAGSDDSEDDYDVKVVKKVKAAPKPKAKVPLPSDDDIVP
AAPLKLVKAAPKPKAKVPLPASDSSVPEVVVPAKVAPKPVVKKAAPKKRASLEAEQDEEEDEAPKPAPKKKKVEK
KVVELSEESEEDIFTRPAKKPAAAAKVVKKAVPKKAETYDDSDDETPVIKKPVKKAAEAKKVVDSDDDEEVPAKK
AAPKPKAAAKPKAAPKKTLVLSSDEDEELEAVPTPKPRAARAAAAVKPKPTYVDSDDDEVPSEEEESDFEQESD
KEGG Ontology ID : K03164
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Gene3D 3.30.1490.30 G3DSA:3.30.1490.30 710-746 N/A
PRINTS PR00418 DNA topoisomerase II family signature 187-202 N/A
PRINTS PR00418 DNA topoisomerase II family signature 224-237 N/A
PRINTS PR00418 DNA topoisomerase II family signature 267-281 N/A
PRINTS PR00418 DNA topoisomerase II family signature 446-459 N/A
PRINTS PR01158 Topoisomerase II signature 572-582 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 587-594 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 635-648 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR00418 DNA topoisomerase II family signature 659-675 N/A
PRINTS PR01158 Topoisomerase II signature 678-693 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR00418 DNA topoisomerase II family signature 698-709 N/A
PRINTS PR01158 Topoisomerase II signature 747-758 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 859-882 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 906-928 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 936-956 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 1041-1055 GO:0003677, GO:0003918, GO:0005524, GO:0006265
PRINTS PR01158 Topoisomerase II signature 1124-1150 GO:0003677, GO:0003918, GO:0005524, GO:0006265
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_14_330,3.30.1360.40-FF-000003,1013-1115 FunMod -1.71472 Putative type II topoisomerase family protein LAN_14_330,3.30.1360.40-FF-000003,1013-1115
LAN_14_330,3.30.230.10-FF-000008,422-544 AlphaFold2 94.8 Putative type II topoisomerase family protein LAN_14_330,3.30.230.10-FF-000008,422-544
LAN_14_330,3.30.565.10-FF-000004,143-394 FunMod -1.20889 Putative type II topoisomerase family protein LAN_14_330,3.30.565.10-FF-000004,143-394
LAN_14_330,3.40.50.670-FF-000001,573-737 AlphaFold2 92.1 Putative type II topoisomerase family protein LAN_14_330,3.40.50.670-FF-000001,573-737
LAN_14_330,3.40.50.670-FF-000001,738-832 AlphaFold2 92.22 Putative type II topoisomerase family protein LAN_14_330,3.40.50.670-FF-000001,738-832
LAN_14_330,3.90.199.10-FF-000002,833-1011 AlphaFold2 96.54 Putative type II topoisomerase family protein LAN_14_330,3.90.199.10-FF-000002,833-1011
Ligand binding site information :
Structure ID Residues
LAN_14_330,3.30.565.10-FF-000004,143-394 190,193,194,195,197,198,199,201,202,205,225,227,230,232,248,249,254,255,256,257,267,268,269,270,271,272,273,274,275,326,32
8
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_14_330,3.30.230.10-FF-000008,422-544 1013,1014,1015,1017,1030,1042,1043,1046,1047,1048,1049,1050,1080,1081,1082,1109,1110,1111,1112
LAN_14_330,3.40.50.670-FF-000001,573-737 1,2,3,7,8,11,13,15,22,23,24,26,28,29,30,31,33,75,77,79
LAN_14_330,3.40.50.670-FF-000001,738-832 145,156,190,194,197,247,248,251,252,253,254,255,256,257,258,259,260,262,263,266,267,268,269,270,271,272,273
LAN_14_330,3.90.199.10-FF-000002,833-1011 21,48,49,51,61,98,99,100,101,102,104,105,107,108,111,112,116,131,132
LAN_14_330,3.30.1360.40-FF-000003,1013-1115 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,25,26,27,87,90
LAN_14_330,3.30.565.10-FF-000004,143-394 1,3,4,5,9,10,11,12,14,44,45,53,112,113,115,125,126,128,132,135,138,139,140,142,143,144,145,146,147,148,149,150,178

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