Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_14_311
Category : putative
Original description : Putative SNF2/RAD54 helicase 
Sequence : MQAAPSAPAAPTPFKMQGTSLTAERFRAILERVKVLRSQGLTEETSSELRNLVKVVYALQSHNQQNQLRAAQAAQ
QQAAAANGTPPIASTSALSKPNGDLTPPIPPPSPPLVSFTPEQLASLKCQIMAFKLLSRNQPLPPNIQAAVFTPG
EALKLVALNDKRLGSSSHDSDGAMNGTEAAKAEAAEAAEAAREKLLAAEAPLEEVEDPDSLVYPYNAFVHPISVL
HSAQGVPIRRTLFIPNLLPAGLDPQAIADERNRFIDARVQQRVSELEALPSTLAQNDYDDPSFDRATSLASQKLK
ALIELKSLNLLARQKALREDVVRGFNQAASLSLPTDRASFRRSKKQTLRDARLTEQLERKQKAERERRAKQKHLD
HLAEITTHGRDLNAAHRAHQAKFTKLGKALLKFHADAEKDDQRRVERVSKERLKALRADDEEGYLKLIDTAKDTR
ITHLLRQTDAFLESLATAVVAQQNDAVHAENPLAPAEVAPEPMQVDGDEAVDESRFGAVPVFEEEAKDKVDYYNV
AHRIKETITEQPKILVGGQLKSYQIKGLEWMISLYNNHVNGILADEMGLGKTIQTISLITFLIETKKQNGPFLVI
VPLSTMPNWIMEFEKWAPSVKMISYKGSPAQRKQSQWEIRQGGFQVLLTTYEYIIKDRPLLAKIKWIHMIIDEGH
RMKNAQSKLSITLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPKIFGSVKSFDEWFNAPFANTGGQDKIEVN
EEESLLVIRRLHKVLRPFLLRRLKKDVESDLPDKVERVIKCRMSSLQLKLTRQIKEHGMIFTDGPVDAKSKATGI
RGLQNQIMQLRKICNHPFTFEQVERSIDPTGANDATLYRVAGKFEILDRILPKLFVTGHRVLMFFQMTTVMTIFE
DYLNYRRIDHLRLDGTTKHEDRATLLKAFNEPNSKYPIFILSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQD
RAHRIGQKKEVRILRLVTERSVEEQVMAGASRKIEMDKKVIQAGRYDNKSTAEERDEYLRALLDAGDEEVEEDDE
LDEAETLNEAIARSEEERALFTQMDKDRKAGEEAAWAAAGNTGKMPERLIQEYELPEVYRMEHASQVVVDEIFGD
GARRARKAVEYDDGLSEDQWLLALEEEDEDNGVNEKKRAQQRRQAASKLKKQNFDLGSDSEDGGSGSRRRGVVVD
SDDDEPTSKKRGRQSVAPSATSSGDEDEPSRDGKRRKTQLTPEQEAMKVMFDECLDEMEDLDNPTMGHQCSGLFN
AVPNKRDYPDYYAIITQPISLKEIKTKVNNGLYQNLSEFRVDVHLMLSNAMIYNEEGSIVYEDARLLKGVFDAAL
KRLTSGRRD
KEGG Ontology ID : K11786
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF08880 QLQ 113-147 GO:0005524, GO:0005634, GO:0006355
Pfam PF07529 HSA 363-432 N/A
Pfam PF14619 Snf2-ATP coupling, chromatin remodelling complex 1078-1146 GO:0042393
PRINTS PR00503 Bromodomain signature 1283-1299 GO:0005515
PRINTS PR00503 Bromodomain signature 1300-1317 GO:0005515
PRINTS PR00503 Bromodomain signature 1318-1336 GO:0005515
SMART SM00487 ultradead3 541-733 N/A
SMART SM00490 helicmild6 897-981 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_14_311,3.40.50.10810-FF-000008,518-781 ColabFold 88.63 2.207 Chromatin structure-remodeling complex subunit snf21 LAN_14_311,3.40.50.10810-FF-000008,518-781
LAN_14_311,PF00176,557-843 FunMod -0.04288 3.753 SNF2-related domain LAN_14_311,PF00176,557-843
LAN_14_311,PF00271,868-981 FunMod -2.11119 2.715 Helicase conserved C-terminal domain LAN_14_311,PF00271,868-981
LAN_14_311,PF00439,1265-1340 FunMod -0.98374 2.283 Bromodomain LAN_14_311,PF00439,1265-1340
LAN_14_311,PF07529,363-432 FunMod -0.68979 2.353 HSA domain LAN_14_311,PF07529,363-432
LAN_14_311,PF08880,113-147 ColabFold 85.54 2.451 QLQ LAN_14_311,PF08880,113-147
LAN_14_311,PF14619,1079-1146 ColabFold 75.69 3.087 Snf2-ATP coupling, chromatin remodelling complex LAN_14_311,PF14619,1079-1146
Ligand binding site information :
Structure ID Residues
LAN_14_311,PF00176,557-843 557,558,559,560,564,565,566,567,568,579,580,583,587,668,670,696,697,698,768,769,770,790,800
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_14_311,PF14619,1079-1146 572,573,574,575,578,579,678,703,706,707,708,709,710,713,724,725,726,727,730,731,732,733,734,735,759,762,768
LAN_14_311,PF00176,557-843 868,869,870,891,892,893,895,914,915,944,945,946,947,948,949,958,959,960,961,962,963,965,966,967,968,969,971,972,974,975,978
LAN_14_311,PF00271,868-981 1265,1266,1267,1268,1269,1270,1271,1272,1273,1275,1276,1283,1321,1322,1323,1326,1327,1328,1329,1330,1331,1332,1333,1334,1335,1336,1337,1338,1339,1340
LAN_14_311,PF00439,1265-1340 21,22,23,24,27,30,33,34,35,36,37,38,39,41,42,43,44,45,47,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68

Footer