Glaciozyma antarctica protein structure database

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Protein ID : LAN_14_173
Category : putative
Original description : Putative polyadenylate-binding protein type-1 family protein 
Sequence : MSSPSAAPAAELPTEVPAVEAAPATTEAAPAATDAASTTEATEATPAPASAAASTGPNPNTSLYVGELDPTVTEA
MLYEIFSMVGPVSSIRVCRDAVTRRSLGYAYVNYLNANDGERALEQLNYSLIKNRPCRIMWSQRDPALRKTGAGN
IFIKNLDENIDNKALHDTFAAFGNILSCKVAVGSQGESLGYGFVHYDAGEAAQAAIEGVNGMLLNDKVVFVGIHI
PRRERQAKIDEVKAHYTNLYVKNIPLDVTTEEFKALFDKYGSVTSAVITLDSEGKSKGFGFVNYENHDDAHKALE
DLHEKDFRGQQLFVTRAQRKGEREEELKRSYEQKKYETTLKYQGVNLYVKNLDDDVTEEKLQAEFEPFGQITSCK
IMVDEKNVSKGFGFVCFSAPDEATKAVTELNGKMIGTKPLYVSLAQRKDVRKQQLEAQVAQRNQIRTQQMQASGL
PGIAPYPGMPGAPMYYGAPQGYAQPGARGPMPYPQPGPGNLPRPRFYAPGMPPMGPPYGQIPPQQFSQYLPPPQG
PPRGAPRPNGAPAPVAGGRPPMPGQPIPAPGAPLPTNGAPRPGQAPISGQPPRGPPVTGATRPGGYKLNSGVRNA
EEPIAGSGLTAAVLANAAPQEQKQMLGEALYPKIHNSQPDLAGKITGMLLEMDSSELLYLLENEEALGAKIAEAL
DVLEEFSKRTQAEA
KEGG Ontology ID : K13126
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63-132 GO:0003723
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 151-218 GO:0003723
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 244-312 GO:0003723
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 347-415 GO:0003723
Pfam PF00658 Poly-adenylate binding protein, unique domain 614-678 GO:0003723
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_14_173,3.30.70.330-FF-000441,329-446 FunMod -1.23453 2.58 Polyadenylate-binding protein LAN_14_173,3.30.70.330-FF-000441,329-446
LAN_14_173,3.30.70.330-FF-000648,39-144 FunMod -1.64351 2.51 Polyadenylate-binding protein LAN_14_173,3.30.70.330-FF-000648,39-144
LAN_14_173,PF00076,151-218 FunMod -0.28717 2.767 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LAN_14_173,PF00076,151-218
LAN_14_173,PF00076,244-312 FunMod -1.91249 2.141 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LAN_14_173,PF00076,244-312
LAN_14_173,PF00658,614-678 FunMod -1.69822 2.363 Poly-adenylate binding protein, unique domain LAN_14_173,PF00658,614-678
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_14_173,3.30.70.330-FF-000441,329-446 345,346,348,350,351,353,354,373,374,375,377,385,386,387,389,391,395,413,416,418,419,420,421,422,423,424,425
LAN_14_173,3.30.70.330-FF-000648,39-144 67,68,69,92,101,102,103,104,106,119,122,123,124,125,126,130,131,133,135,136,137,141
LAN_14_173,PF00076,151-218 151,152,154,155,157,158,159,160,168,172,180,181,188,189,190,191,193,206,207,208,209,210,211,212,213,214,215
LAN_14_173,PF00076,244-312 244,245,247,248,269,270,271,272,273,282,284,286,288,290,291,292,293,295,296,297,299,300,303
LAN_14_173,PF00658,614-678 624,625,627,628,629,631,632,633,635,639,640,641,643,644,647,648,650,651,652,656,661

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