Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_14_076
Category : putative
Original description : Putative archaeal rpoH/eukaryotic RPB5 RNA polymerase subunit family protein 
Sequence : MEDGERETARLFRVSRTIHELVRDRGYAISEEEIRVSLDDFKAMYAPARGNVDKSQISFKAARPEGDEIYIFYSD
EASVGIKTMRKFITILEEQKIPRGIIIFKTNMTPSANKVIQAMAAQYQIEAFQESELLVNITHHVLVPKHDVLSL
EDKKQLLQKYRLKDTQLPRIQISDPVSRYYGLKRGQVVMITRPSETAGRYVSYRICL
KEGG Ontology ID : K03013
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF03871 RNA polymerase Rpb5, N-terminal domain 5-89 GO:0003677, GO:0003899, GO:0006351
Pfam PF01191 RNA polymerase Rpb5, C-terminal domain 134-206 GO:0003677, GO:0003899, GO:0006351
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_14_076,3.40.1340.10-FF-000002,1-131 ColabFold 86.43 1.835 DNA-directed RNA polymerases I, II, and III subunit RPABC1 LAN_14_076,3.40.1340.10-FF-000002,1-131
LAN_14_076,3.90.940.20-FF-000001,132-207 ColabFold 87.56 2.151 DNA-directed RNA polymerases I, II, and III subunit RPABC1 LAN_14_076,3.90.940.20-FF-000001,132-207
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_14_076,3.90.940.20-FF-000001,132-207 1,2,3,4,5,6,7,8,9,10,11,12,13,42,43,44,47,48,49,61

Footer