Glaciozyma antarctica protein structure database

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Protein ID : LAN_13_487
Category : putative
Original description : Putative EF-G/EF-2 subfamily protein
Sequence : MDDYDEFGNYIGGALSDSDDEEQEEEGQQEERPLRAYDDEVEEEVEEMEISPSSNAIILHDDKTYYPSAAALYGP
GVETMVQEEDAQPLSQPIVEPIKVRKFRVGASGGPEKRFDDEFMMGLAANPEMVRNVAVVGHLHHGKTSLVDMLV
YETHKIDVDCDKPLRYTDTHSLSQSRLISLKSTPMSLVLPTTKGKSYLVNLIDTPGHINFIDEVVAGIRVADGAV
VVVDAVEGVLLTTTTAIQHLVASGIPIVLVVNKVDRLILELRLPPGDAYIKLKHTIEEVNTVISEINPDPALRVS
PEKGNVSFASTQMGWCFTLKSFAKMYADTYGPMDLDQFADRLWGNIYFNPETRKFSKQSAAGSKRGFEHFVLEPL
YKLYSQVLGEDTETLKKTLGALGIVLKPASYKMDVRPLLRLVLSQFFGPANGFVDMLAEHVPNPVEGAKNKVEST
YTGPLDTKLAKAMLECDPKGPLVIQIVKLYPTPDANEFRAFGRVLSGTVVKGQEVKVLGEGYSPEDEEDMVVQTV
EAVMISESRYDIETDGMPAGNFVLLSGVDHSITKTATIVSTDITDELHILRPIKQLTQSVLKVAVEPMNPSELPK
MLDGLRKVNKTYPLVETRVEESGEHVLLGTGELYLDCVLHDLRRMFAEIEIKVSDPVVKFCETVVETSALKCYAD
TPNKKNKLTMIAEPLEKGIAEDIESGKVTIRMPPKQLGGHFQQKYGWDLLASRSIWAFGPDEQGPNILMDDTLPS
DVDKKLLYSVKESIKQGFQWGCREGPLCDEPIRNVKFRLLGADLATEPIYRGGGQIIPTARRVCYSSFLMATPRL
QEPVYYVEVQAPQDCVPAIYEVLARRRGHVTKDLPKPGSPLYTVQAYIPVVDANGFETDLRTHTQGQAFCLQTFD
HWSICPGDPLDKTIQLRPLEPAPAQHLARDFILKTRRRKGLNDQVNVSKYLESEMIVALSASDSIDLLG
KEGG Ontology ID : K12852
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd16264 snRNP_III 584-655 N/A
CDD cd04098 eEF2_C_snRNP 827-906 N/A
FunFam 3.90.1430.10-FF-000001 116 kDa U5 small nuclear ribonucleoprotein component 319-422 N/A
FunFam 3.30.230.10-FF-000009 116 kDa U5 small nuclear ribonucleoprotein component 665-819 N/A
Pfam PF16004 116 kDa U5 small nuclear ribonucleoprotein component N-terminus 2-105 N/A
Pfam PF03144 Elongation factor Tu domain 2 490-563 GO:0005525
PRINTS PR00315 GTP-binding elongation factor signature 131-144 GO:0003924, GO:0005525
PRINTS PR00315 GTP-binding elongation factor signature 200-210 GO:0003924, GO:0005525
PRINTS PR00315 GTP-binding elongation factor signature 216-227 GO:0003924, GO:0005525
PRINTS PR00315 GTP-binding elongation factor signature 252-261 GO:0003924, GO:0005525
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_13_487,2.40.30.10-FF-000029,439-580 FunMod -1.42235 Putative EF-G/EF-2 subfamily protein LAN_13_487,2.40.30.10-FF-000029,439-580
LAN_13_487,3.30.230.10-FF-000009,665-819 AlphaFold2 94.4 Putative EF-G/EF-2 subfamily protein LAN_13_487,3.30.230.10-FF-000009,665-819
LAN_13_487,3.30.70.240-FF-000004,820-941 AlphaFold2 95.6 Putative EF-G/EF-2 subfamily protein LAN_13_487,3.30.70.240-FF-000004,820-941
LAN_13_487,3.30.70.870-FF-000002,583-659 FunMod -1.76121 Putative EF-G/EF-2 subfamily protein LAN_13_487,3.30.70.870-FF-000002,583-659
LAN_13_487,3.40.50.300-FF-000646,122-318 AlphaFold2 87.33 Putative EF-G/EF-2 subfamily protein LAN_13_487,3.40.50.300-FF-000646,122-318
LAN_13_487,3.90.1430.10-FF-000001,319-422 AlphaFold2 92.01 Putative EF-G/EF-2 subfamily protein LAN_13_487,3.90.1430.10-FF-000001,319-422
LAN_13_487,PF16004,2-106 AlphaFold2 71.24 Putative EF-G/EF-2 subfamily protein LAN_13_487,PF16004,2-106
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_13_487,3.30.230.10-FF-000009,665-819 478,479,480,481,482,483,484,485,488,489,491,493,530,531,532,533,534,535,536,537,538,546,547
LAN_13_487,3.40.50.300-FF-000646,122-318 1,4,8,71,106,109,110,112,113,114,115,116,117,119,144,147,148,151,152,154,155
LAN_13_487,3.90.1430.10-FF-000001,319-422 583,585,586,587,612,614,630,631,632,633,634,636,637,639,640,641,655,656,657,658,659
LAN_13_487,2.40.30.10-FF-000029,439-580 16,17,18,22,23,27,28,30,31,33,35,44,45,48,49,50,51,53,55,56,57,59,60,62,86,87,88,89,91,92,116,143,187,190,191,192,193,194,195,196
LAN_13_487,3.30.70.870-FF-000002,583-659 1,3,4,7,8,12,25,46,49,50,51,52,54,55,56,57,58,59,61,63,96,97,98,100,101,102,103,104
LAN_13_487,PF16004,2-106 1,4,6,7,8,10,36,38,50,54,55,56,57,58,59,60,61,62,63,64,65,66,67,72,78,80

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