Glaciozyma antarctica protein structure database

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Protein ID : LAN_13_375
Category : putative
Original description : Putative signal recognition particle 54 kDa protein homolog
Sequence : MVLEHLGRRLNSAISSLSASSPIDEAALDLALKTICSALLESDVNVKLVKTLREKVKVRVLPQLVEIAKKSSGDA
LVGSKGKQLLQKTVFEELVQLVDPGESAPPAFNPKKGQTNVIMMVGLQGAGKTTTCTKLATHYTRRGLKTALVCA
DTFRAGAFDQLKQNAVKAKVPFFGSYTETDPVAIALAGVTKFRSERFDLIIVDTSGRHRQESELFEEMVQIGEAV
KPDMTVMVLDGAIGQAAEAQSRAFKDASNFGAIIVTKLDGHAKGGGAISAVAATKTPIIFIGTGEHLHDLEKFAP
QAFISKMLGMGDMQGLMEQAQEIALANPDRQENMMKKLEKGEFTVRDLKEQMATIMGMGPLSKLTSMIPGMSEMM
GAGGNDDEASKKMKRIAFIFDSMSTFELDSDGTCFRTPPASTTASTSATPAPAPPSENGKEKAVSSTGPREPNAR
VLRVARGSGTSVNEVEEVLAQHLMFSGMVKKAGGKSGWMTKMKQQQGGARGGRPPMGPGGMPDLSKLSAGQMAQM
QNMLPAGMREQMSQPGAMAQMQEMMKSMGGGGGFPGMGGGMPDMSKIMGMMGR
KEGG Ontology ID : K03106
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF02881 SRP54-type protein, helical bundle domain 6-93 GO:0005525, GO:0006614
ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 282-295 GO:0005525, GO:0006614
SUPERFAMILY SSF47446 Signal peptide-binding domain 311-407 GO:0006614, GO:0008312, GO:0048500
SUPERFAMILY SSF47446 Signal peptide-binding domain 448-481 GO:0006614, GO:0008312, GO:0048500
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_13_375,PF00448,115-309 FunMod -1.30841 2.741 SRP54-type protein, GTPase domain LAN_13_375,PF00448,115-309
LAN_13_375,PF02881,6-93 FunMod -0.85608 3.228 SRP54-type protein, helical bundle domain LAN_13_375,PF02881,6-93
LAN_13_375,PF02978,342-479 FunMod -0.05834 2.334 Signal peptide binding domain LAN_13_375,PF02978,342-479
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_13_375,PF02881,6-93 6,9,34,37,38,39,40,41,42,43,44,45,48,51,52,89,90,93
LAN_13_375,PF02978,342-479 351,353,354,355,356,357,358,359,360,361,363,364,365,366,367,368,369,370,371,372,373,374,375,376,377,378,379,381

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