Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_13_183
Category : putative
Original description : Putative helicase
Sequence : MAPKQDLSGYQYSAMASLVTTADRSTIPRRDNEPTGEAETLVGRIDPKTMGSRAFKEDVDLEGKRKKAEKERERR
EKKEEGPLGGRKKVAAGVRYGNVLEATQDLEGLNYRPRTAETRAVYELMLAAVHTSLGDQPQDMVRSATDLVLEY
LKSEDLKDFDKKREIEGLVGSVNAEQFAQLLALSKKITDYGEEEEKGKNDEDEKEGAIDDDLGVAVVFEDEEEEE
EDEEGYERKDGMDMPAGEGAGSDTEEQITIGGASSSMAAGSADSDIVSAREIDGFWLQRLIAQSYSDPLEAAEKT
TAAMAVLSSESGTREVENALMDLTDFDHFDLVKVLMTNRDKIVWCTKLARSDENEKVDVQVAMREKGVGWILKEL
ASNGDKARRGDAMDVDDSKIDPSSLKANLAAGSLAPPPRKTVDLEAMAFSQGARLMSNKKCKLPEGSFKRSKKGY
EEVHVPAPKPAPFKEGELVPISSLPEWARAAFKGTTNLNRIQSRLYPIAFGTDEPILLCAPTGGGKTNVAMLTIL
NEMGKWRNEQTGAFAFDDFKIVYVAPMKALVQEMVGNFSKRLASFGVVVNELTGDRQLTKEQISGTQIIVTTPEK
WDVITRKSTDTSYTNLVRLIIIDEIHLLHDERGPVIESIVARTIRRMEQTQDYVRLVGLSATLPNYRDVAKFLHV
NPERGLFHFDSSYRPCPLKQEFIGVTEKKAIKRYQITNEICYEKVLEHAGTDQIIIFVHSRKETAKTAKFLRDHA
LENNTITQFLRADPATREILTSEAEAVQDPNLKDILPFGFACHHAGMNRADRTLVEDLFGDGRIQVLVSTATLAW
GVNLPAHVVIIKGTQIYNPEKGRWVELSPQDVLQMLGRAGRPQYDTFGEGIIITNHSELQYYLSMMNQQLPIESQ
FVSRLADNLNAEIVLGTIRNRDEAVQWLGYTYLYVRMLGTPALYSVSPDYREEDPLLIQKRSDIIHTAAVILEKC
SLIRYDRRTGVFQSNELGRIASGYYVTHTSMGTYNQHLKSAAGFIELFRIFSLSEEFKHVPVRAEEKLELAKLLE
RVPIPVKEGVDDPSAKINVLLQAYISQLKLDGFALVADMVYVTQSAGRILRAIFEICLKRGWAALTHKALAMCQM
VEKRMWGSMSPLRQFKGVPADIIRRAEKKEFPWYRYFDLDAAALGELIGEPKAGRLVHRLVHQFPKLELQAQVQP
ITRSLLRVDLIITPDFQWDEKVHGNAEAFWILVEDVDGEIILFHDQFLLRQRYADQEHHVNFTIPMLDPLPPNYF
ISVVSDRWLHSETRLPISFKHLILPDKFPPPTTLLDLQPLPISALHNKEFEAIYSSSITSFNKIQTQVFQALYAS
NDNVFVGAPTGSGKTIAAEFALLRLWSQENAPRAVCIEPFQDVVDTRVAEWTAKFGDLKGGKEIVALTGETSTDI
RLLEKGDLIICTPGQWDLLSRRWKQRKNVQTIGLLIADEIQLIGGWEGATYEAIVSRTRYVAAQTENKTRIVAFG
VSLANARDLGEWMGATAQTIFNFSPGARPLPMEVHIQSFSVPHFPSLMIQMAKPAYLAIVEYAEDRPVLCFVPSR
RQCRMSARDILVYCLADQDPTRFLNIDEAELAPHLEHVTDPELKETLQNGIGFYHEALSKQDKRIVEHLFQSGAI
QVVVASKDTAWSIPLTAYMVIIMGVQTFEGKEHRYVDYPFTDVLQMMGRACRPSHDASSRCVLMCQQVRKEFFKK
FLNEGLPIESSLHLTLHDHFNAEIVTKTIENKQDAVDWLTWTWMYRRLVANANYYNMQGDDYLSELVEQTLSDLQ
NSKAIAVEDEMDTTPMNLGMIAAYYNINYVTVDIFSMSLTEKTKLKGLLEIVSTAAEFEVIPIRHHEDVFLRKLY
DRVPVKLVKADYNSPYFKTNILLQAHFSRFVLPADLAADQAVILSKVLNLLSACVDVMSSNAFLNALGAMELSQM
CVQAMWDSDSPLKQIPGFTSEVIKRCVDADVKSVYDIMELEDDQRNNLLQMDTRQMRDVAKFCNAYPSIELAHEV
VDADELTAGAPITINISLEREVDEDDKSDQVVPAPFFPVKKTESMWVVVGEPSTKQLLSIKKITVSVRLAMKLDF
VLPKGTHQLKLYLISDSYMGADQEHDFELKVAEAADSDEDSDDAMDED
KEGG Ontology ID : K12854
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd18795 SF2_C_Ski2 1528-1716 N/A
FunFam 1.10.10.10-FF-000024 U5 small nuclear ribonucleoprotein helicase 898-989 N/A
FunFam 1.10.3380.10-FF-000001 U5 small nuclear ribonucleoprotein helicase 990-1131 N/A
FunFam 1.10.150.20-FF-000004 U5 small nuclear ribonucleoprotein helicase 1132-1187 N/A
FunFam 2.60.40.150-FF-000004 RNA helicase, activating signal cointegrator 1 1189-1297 N/A
FunFam 1.10.10.10-FF-000012 U5 small nuclear ribonucleoprotein helicase 1734-1822 N/A
FunFam 1.10.3380.10-FF-000002 Activating signal cointegrator 1 complex subunit 3 1823-1956 N/A
FunFam 1.10.150.20-FF-000013 U5 small nuclear ribonucleoprotein kDa helicase 1959-2015 N/A
Pfam PF18149 N-terminal helicase PWI domain 269-375 N/A
Pfam PF00270 DEAD/DEAH box helicase 490-669 GO:0003676, GO:0005524
Pfam PF00271 Helicase conserved C-terminal domain 716-866 N/A
Pfam PF00270 DEAD/DEAH box helicase 1338-1499 GO:0003676, GO:0005524
SUPERFAMILY SSF81296 E set domains 2019-2133 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_13_183,1.10.10.10-FF-000024,898-989 FunMod -1.49549 2.576 U5 small nuclear ribonucleoprotein helicase LAN_13_183,1.10.10.10-FF-000024,898-989
LAN_13_183,1.10.150.20-FF-000004,1132-1187 ColabFold 93.87 1.716 U5 small nuclear ribonucleoprotein helicase LAN_13_183,1.10.150.20-FF-000004,1132-1187
LAN_13_183,1.10.150.20-FF-000013,1959-2015 FunMod -1.69962 2.761 U5 small nuclear ribonucleoprotein kDa helicase LAN_13_183,1.10.150.20-FF-000013,1959-2015
LAN_13_183,1.10.3380.10-FF-000001,990-1131 ColabFold 97.89 1.741 U5 small nuclear ribonucleoprotein helicase LAN_13_183,1.10.3380.10-FF-000001,990-1131
LAN_13_183,1.10.3380.10-FF-000002,1822-1956 ColabFold 94.19 1.676 Activating signal cointegrator 1 complex subunit 3 LAN_13_183,1.10.3380.10-FF-000002,1822-1956
LAN_13_183,2.60.40.150-FF-000004,1189-1297 ColabFold 95.4 1.9 RNA helicase, activating signal cointegrator 1 LAN_13_183,2.60.40.150-FF-000004,1189-1297
LAN_13_183,2.60.40.150-FF-000133,2016-2134 ColabFold 94.64 2.586 Pre-mRNA splicing helicase, putative LAN_13_183,2.60.40.150-FF-000133,2016-2134
LAN_13_183,3.40.50.300-FF-000062,690-891 ColabFold 94.49 1.955 U5 small nuclear ribonucleoprotein helicase LAN_13_183,3.40.50.300-FF-000062,690-891
LAN_13_183,3.40.50.300-FF-000102,476-689 ColabFold 92.66 1.969 RNA helicase, activating signal cointegrator 1 LAN_13_183,3.40.50.300-FF-000102,476-689
LAN_13_183,3.40.50.300-FF-000254,1298-1528 ColabFold 94.41 1.779 U5 small nuclear ribonucleoprotein helicase LAN_13_183,3.40.50.300-FF-000254,1298-1528
LAN_13_183,3.40.50.300-FF-000368,1529-1733 ColabFold 94.72 1.928 U5 small nuclear ribonucleoprotein 200 kDa helicase LAN_13_183,3.40.50.300-FF-000368,1529-1733
LAN_13_183,PF18149,269-375 ColabFold 96.82 1.624 N-terminal helicase PWI domain LAN_13_183,PF18149,269-375
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_13_183,1.10.150.20-FF-000004,1132-1187 898,899,900,901,902,908,912,927,929,930,931,932,934,935,936,938,939,940,941,942,943,944,956
LAN_13_183,1.10.3380.10-FF-000002,1822-1956 1,2,3,5,7,8,9,10,11,21,25,26,27,28,29,31,32,33,52,53,54,56
LAN_13_183,2.60.40.150-FF-000004,1189-1297 1961,1964,1983,1984,1985,1986,1987,1988,1989,1990,1991,1992,1993,1994,1995,1996,1997,1998,1999,2001,2003,2004,2005,2006,2007,2008,2010,2011,2012,2013,2014,2015
LAN_13_183,2.60.40.150-FF-000133,2016-2134 1,2,3,4,5,7,8,9,11,12,13,15,23,24,25,33,35,56,58,59,80,82,83,84,102,103,106,109,110,111,118,121,122,124,125,127,128,129,131,132,133,134,135
LAN_13_183,3.40.50.300-FF-000062,690-891 1,3,27,28,34,36,38,40,42,44,46,55,56,57,58,60,87,91,93,94,95,96,97,99,100,101
LAN_13_183,3.40.50.300-FF-000102,476-689 1,3,39,40,43,44,45,46,47,48,49,99,101,103,104,105,107
LAN_13_183,3.40.50.300-FF-000254,1298-1528 1,2,3,4,132,136,137,138,139,140,141,169,170,173,174,177,178,179,180,182,183
LAN_13_183,3.40.50.300-FF-000368,1529-1733 13,14,15,37,38,40,43,77,148,149,151,152,153,154,155,157,162,186,187,189,190,210,211,213,214
LAN_13_183,1.10.10.10-FF-000024,898-989 1,2,3,4,5,6,7,93,94,95,96,140,142,166,167,169,170,171,172,173,174,175,177,178,180,181,204,206,207,211,212,215
LAN_13_183,1.10.150.20-FF-000013,1959-2015 1,3,4,6,161,162,163,166,167,170,197,198,199,200,201,202,203,204,205

Footer