Glaciozyma antarctica protein structure database

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Protein ID : LAN_13_091
Category : putative
Original description : Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
Sequence : MTSLSTWVSDHLLQFLGASDSTTVEYFITLASSSKSPQALLSTLVANGLPSTPAASAFATSLHSRAPRKAGPTGT
SLKAKAKADEERKKAEKERADLLKQRFSILDDAPEGEEREKREKRDKGKGKAVKNLRKRGEEDVWEIDEEEREAK
RLREDERFAREEDPVEREARLRAEDAKERDEFAARMKDKDKDRTKKLVEDRSSKLDAEALARRALSKDPSLLEGA
MPSLRERSRQSYLGKREQQQLDLLRIEIADEERDFKGIRMSKREVAELDRKKQLLRLAEERLAVDEGFDGYQMPD
DYITEQGKIDSKKKKDLLSARYSDAKPRSRNVRDAEFTTDLEQYEMEQTAKAQLHSGAMDREVIEEEYDFVFDES
VKIQFALDADDRLEGTLGGKDAALQAQIDEAERRAQSIDQVRKSLPVFEWREQFLDAVREYQVLIIEGETGSGKT
TQLPQYLHEAGFTKGGLKIGCTQPRRVAAMSVAARVAEEVGCRLGNEVGYSIRFEDCTTDKTVIKYMTDGMLLRE
FLTEPDLAGYSCMIIDEAHERTLSTDILLGLVKDIARFRPDFRLLISSATLNAAKFSEYFDDAPVFRIPGRRYPV
DILYTPQPEANYLHAAVTTIFQIHTTQPKGDILVFLTGQDEIEAAQENLEETARALGNKVAELMICPIYANLPTE
MQARIFEPTPEGARKVVLATNIAETSITIDGVVYVIDPGFVKQNSYNPRSGMESLVVTPCSRAAAGQRAGRAGRV
GPGKCFRLYTKHAYTHELDQDTIPEIQRTNLGMVVLMLKSLGINDLIGFDFLDPPPGDTLIRALDLLYALGAFND
KGELTKMGRRMAEFPMDPALSKSILASEKYHCTEEVLTICSMLSESGSLFYRPKQKKLEADTARQNFVKPGGDHF
TLLNVWEQWQDSGFSISWSYEHFIQIKSLTRVRDIRDQLVQLCERVEIFVEGNPNPSDILPVQKAISAGYFQNTG
RLNRSGDAYRTIKTNQTVNIHPSSSMFQHQPPPKMILWFELVMTSREYARQVMEIKPEWLLEVDFFKPADLDALS
GVKKGQVKQIGAAPIAQR
KEGG Ontology ID : K12813
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.20.120.1080-FF-000001 Pre-mRNA-splicing factor ATP-dependent RNA helicase 796-895 N/A
Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 962-1037 N/A
ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 536-545 N/A
SMART SM00490 helicmild6 650-751 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_13_091,3.40.50.300-FF-000594,377-596 AlphaFold2 89.99 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein LAN_13_091,3.40.50.300-FF-000594,377-596
LAN_13_091,PF00271,623-751 FunMod -1.02508 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein LAN_13_091,PF00271,623-751
LAN_13_091,PF04408,813-902 FunMod -0.65702 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein LAN_13_091,PF04408,813-902
LAN_13_091,PF07717,962-1037 FunMod -0.6765 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein LAN_13_091,PF07717,962-1037
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_13_091,3.40.50.300-FF-000594,377-596 2,4,6,98,99,100,101,102,104,127,128,129,130,144,145,147,148,151,169,171,172,173,175
LAN_13_091,PF07717,962-1037 962,965,966,968,969,970,971,972,973,996,998,1014,1015,1016,1017,1023,1025,1026,1027,1028,1029

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