Glaciozyma antarctica protein structure database

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Protein ID : LAN_12_529
Category : putative
Original description : Putative RNA polymerase beta' chain family protein
Sequence : MDPAQPISSTITSISFSALQSDDCRRISVKQVVNPVLFDNQNQPNAGGMYDPAFGPRGKGDICTTCRLSSFDCPG
HFGHIELPAPVFHPLYMTQAFQLLRGTCTYCHHFLATEVSVLKYIAKLTLLEHGLVVQADAIDSLTMRTNAPVPK
GAAGKAANATLSDAEEGESTEEAAETVAQYKHRLDTWVSVCLSRSKEQGRDEYKKSGIVYDRRKKVIAEFLKSLT
KKKCGRCGAYAHRTRKEGHTKIIEYGLVPKQRHYHKAAGIRRRNVLLLQALAARSQAEDAIMDGRDEDGASEEES
ESEEEDEVVGITGKGKGKGRKRRGSSTSEESEDAEKEEMGMDVDEDANDSSDEEKDEEGRTEKDVGGTRKKQTER
IVPPDEVRAHLRLLFKHEAPIVALLYAPHGPLATAASPVASTSKASADIFFMDVVCVPPTRFRPAATMGDQVFEN
PQNSLLNGILRQTFTVRDLSVAFAQASLPVSEEVIELVGEKGRPKPDKARLYTQLLESLINLQIAVTSMMDSTKN
PMIVRGGKLPPPGVKQLLEKKDGLFRKNMMGKRVNYAARSVISPDVNIETNEIGVPPIFARKLTFPEPVTAHNVQ
HLRRLVINGPNIHPGASYIQMEDGNLLSLDRLTEEERTAHANKLLTPESRSTTSRLDRPDVGLPHTRTAQINRKV
YRHLADGDIVILNRQPTLHKPSMMCHRVRVLKGEKTIRMHYANCNSYNADFDGDEMNMHFPQSLIAQAEARLIAN
TDNQYLVPTSGNPLRGLIQDHVVAGVWLTNKDTFFTREEYYQLIYGALRPEDDYSGGGMVLTVPPAIWKPQPLWT
GKQVISTLMKNIKPPNAGGLNFSCRGKVPGSAWGVHTAEENVLFVDGELLTGILDKAQIGASPYGLVHSVFELYG
AEVAGKLLSILSRVLTKFLQSRAFSCRMDDLLLTEKGNADRRAMLAGVNEKGLDAALEYVGLLDADKTRPETADD
LRLRLELILRDDYKLAGLDATVEGETNQVTTKLIKTCLPSGLVKPFPHNNMQMMTVSGAKGSNVNASQISCLLGQ
QSLEGRRVPTMVSGKTLPSFKAFETAPRAGGFVAGRFLTGIRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLI
KHLEGLRVHYDNTVRNSDSSVLQFNYGEDSLDVTKQKHLMQFEFAVRNVASLVERFRPKEVLTSDKIQDMGHTYS
KKALKHPNENPPSLSLYNPSTHLGSISETYAAAIEKYIETNPHRLLKTKKKHRADWPAFIRADDLMTVDHFRSLM
NMRYMRSLVEPGEAVGLLASQGVGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASQNIRTPTMQLPVLDS
VSEERLKTFCASSTRLTLSQIVDEVTVRERLSAKTSDNAFSRQKLYTIRLALYPRADYTSEYDITPEQILLGIQR
TFVPILDRAILKEIKNNDKETKTQAGDMGKARKVSTAALARGDDLAGEVAEDDGVVARDEGEEDDGDADDARRGR
QGKDEVTYESDEDEDDESGEVGLEKAFADSGSEEEDSASEDESEEAIKRNKVESVDRMKAIERKIAGSSRYVDRV
KFDKEGGEWCELELEFSSQAHKLLLVGIVETCCRSAIVHEIAGISRCFVAKAANEKAAAIRMAMTEGVNLKACWN
FANGVIDLNQIYTNDIGAILRTYGVEAARTSIIKEMSGVFSVYGIGVDFRHLTVIADYMTCEGAYKPFNRTGLSN
NSSPFLKASFETTANFVAEAALFGDFDDLGTPSANIVLGKVPKSGTGVFGVLSAVEA
KEGG Ontology ID : N/A
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.10.274.100-FF-000006 DNA-directed RNA polymerase subunit 759-925 N/A
Gene3D 1.10.132.30 G3DSA:1.10.132.30 979-1068 N/A
Gene3D 3.30.1490.180 RNA polymerase ii 589-677 N/A
Gene3D 1.10.357.120 G3DSA:1.10.357.120 1155-1284 N/A
Gene3D 1.10.150.390 G3DSA:1.10.150.390 1730-1773 N/A
Gene3D 3.30.70.2850 G3DSA:3.30.70.2850 1366-1615 N/A
Gene3D 4.10.860.120 RNA polymerase II, clamp domain 4-125 N/A
Gene3D 6.10.250.2940 G3DSA:6.10.250.2940 1070-1128 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_12_529,PF00623,556-750 FunMod -0.18105 Putative RNA polymerase beta' chain family protein LAN_12_529,PF00623,556-750
LAN_12_529,PF04983,754-931 FunMod -1.33882 Putative RNA polymerase beta' chain family protein LAN_12_529,PF04983,754-931
LAN_12_529,PF04997,10-238 AlphaFold2 84.29 Putative RNA polymerase beta' chain family protein LAN_12_529,PF04997,10-238
LAN_12_529,PF04998,1090-1729 FunMod -0.48754 Putative RNA polymerase beta' chain family protein LAN_12_529,PF04998,1090-1729
LAN_12_529,PF05000,1001-1083 FunMod -0.00346 Putative RNA polymerase beta' chain family protein LAN_12_529,PF05000,1001-1083
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_12_529,PF04997,10-238 575,576,686,691,692,693,694,695,696,698,699,700,702,715,716,717,718,719,720,721,723,724,725,726,736,740,743,746,747,748,749
LAN_12_529,PF00623,556-750 7,8,9,10,11,12,13,14,15,16,18,19,70,71,73,74,76,77,78,79,80,81,82,83,84,85,86,87,89,90,91,93,95,96,97,98,99,100,222,223,224,225,226,227,228
LAN_12_529,PF05000,1001-1083 1009,1012,1013,1014,1015,1016,1017,1018,1019,1020,1021,1022,1023,1024,1025,1026,1028,1029,1030,1031,1032,1033,1034,1035,1036,1037,1039,1040,1042,1043,1044,1045,1046,1047,1064,1078,1083

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