Glaciozyma antarctica protein structure database

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Protein ID : LAN_12_114
Category : putative
Original description : Putative RsmB/NOP family protein
Sequence : MSGRGNGGGQGPAKRPKKGKKPAAKEGSDSDDLEGLKDEEEEEMSEEEGEDKGLEAARSALFNDEDLVAPVSDEE
EDDLEDLDRESDDEEDDDEELEDDFGLDLEYGAEGVTLDDFDDFQMTAAEAEQMPASGKKAAKRAARKVYNSDDE
DESTEAARASKGRQAPEPVEGQEEDATLSELEVDSEDELEEGPLDDLRAVERRMRNSARVLGNWKELGASSGKSR
SDLVEQLVGDVCQYHGYTPYLAEKLFDLFGVDEALQFFNTSDTPRPLTLRVNTLKTRRRDLAQALINRGVNLEPL
EGGWSKVGLQVFSGGGVPVGATPEYLAGHYILQSASSFLPVIALAPQPHERVLDMSAAPGGKTTYMSALMGNTGE
VWANDSSRGRIKGLGGNVARLGCRNVIITNVDGREFPKIIGGFDRVLLDAPCSGTGVISKDQSVKVNKTERDFTL
LSHLQKQLVLCAIDSVSPNSEKGGYVVYSTCSVTTEENEAVVSYALRKRPHAKLVETGLAFGKEGFQRFRGKEFG
KNMTMTRRFYPHVHNMDGFFVAKFKVGKPAKKVTEDESLPESYKPLVEGEDASDDDEDANLFDDAEDDKLIAETK
KRHLKSIGVNYKATKGASAPAPKA
KEGG Ontology ID : K14835
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
PRINTS PR02012 RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 225-245 GO:0008168
PRINTS PR02012 RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 258-270 GO:0008168
PRINTS PR02012 RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 281-294 GO:0008168
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324-338 GO:0001510
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 353-363 GO:0001510
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 473-489 GO:0001510
PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 534-551 GO:0001510
ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 418-429 GO:0003723, GO:0008168
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_12_114,PF01189,341-550 FunMod -0.17028 2.833 16S rRNA methyltransferase RsmB/F LAN_12_114,PF01189,341-550
LAN_12_114,PF17125,252-337 ColabFold 84.28 2.885 N-terminal domain of 16S rRNA methyltransferase RsmF LAN_12_114,PF17125,252-337
Ligand binding site information :
Structure ID Residues
LAN_12_114,PF01189,341-550 341,342,343,356,358,359,361,362,422,424,426,427,429,432,435,477,479,481,532,534,541,542,544,546,548
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_12_114,PF17125,252-337 342,424,432,434,435,436,481,483,508,509,510,511,512,513,514,515,516,517,518,519,520,521,522,523,524,525,526,527,528,532,533,534,535,536,537,538,539,540,541,542,544,546
LAN_12_114,PF01189,341-550 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,53,81,82,83,84,85,86

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