Glaciozyma antarctica protein structure database

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Protein ID : LAN_12_096
Category : putative
Original description : Putative PAB-dependent poly(A)-specific ribonuclease subunit
Sequence : MATRRGMALWTVETDPPAPLTTFAYTPSRSSEIIATGPGSDMFVVNVNRGSIVRRQAAPVPILHLRRATQLVAST
TTGSLVLLDARSPEMAVQESVLAHTGGISQVETEGNYIVTIGYTMRQGLPLPDPYLKLHDVRYLRPLSPIPFPSP
PAMVRFHPRLQSTVVVASAEGRVQMLDLKEVGKGSVFQVETSSYLTSMAIAPTGEGLAFGDADGYVHLWAAQEDA
KFCRFEGEVELPDTVEAPERIDWREDTPLNSIGMPYYTSPLFSLLPTAFDFTPSPTHHSRVPLDPNILATVKTVD
FVGYAPYPASARAAGRRNQVTLGPGGKGGKRRVDVPMFRSEKERAETKKKRDRIVSVAKAEEEEDAASAQMPNHY
RKVEIKYSRFGVEDFDFGFYNKTRHSGLETHITNSYTNSLLQALHYTGPVRTLAESHTFSACTKENCLLCEAGFL
FRMLGNAKGMNCQASNFSRAFCASPQVAALGLMDHDGESSTVAYASLIQTFNRYLLEQMTAESDSPGTNPSLIKS
NPDSSSRPPLAQLLKVEAKTISMCQQCGAATSRDSSLSVIDLVYPRRAMSNEIAPSSDYATILRNSIHRETIARM
VCSSCRQTAHLRIRRVLADAQLPPVLVINAGVRTSDELEIWLDGRQGPGTRFLQPRFSIGKQGDAVVVLSQPDLA
ATGGVTYELRAMVAQIQAEGDPPHLVALARVSSEAETPGGSWHVFNDFLVRPISETEALSFPSSWKIPAVLFYQR
VDANELLDFASLPLSADPAILCQDITISRNRDPALVKHQPFQPAELPRRGTLVSIDAEFEEAEFHSDGTKKVIRP
SRMTLARVSVLRGEGPETGIPFIDDHIHTSDTVVDYLTEFSGIRAGDLDPFLSRHTLVPLKVAYKKLRMLVDLGC
VFIGHGLNKDFRIINIYIPPEQIIDTVNIYHLPHRQRKLSLRFLAWAVLHSAIQADTHDSIEDARTALQLYEENN
RLEAEGTWEDVLEEVYREGKQTNFKVPGLEPPVPVRVDTASPGFGALGPLPPQRIFQQPGFRTQQRSYGP
KEGG Ontology ID : K12571
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF13423 Ubiquitin carboxyl-terminal hydrolase 401-725 N/A
Pfam PF00929 Exonuclease 823-971 N/A
Gene3D 2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase 1-229 GO:0005515
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_12_096,3.30.420.10-FF-000028,800-997 FunMod -0.26634 Putative PAB-dependent poly(A)-specific ribonuclease subuni LAN_12_096,3.30.420.10-FF-000028,800-997
LAN_12_096,PF13423,401-725 AlphaFold2 88.68 Putative PAB-dependent poly(A)-specific ribonuclease subuni LAN_12_096,PF13423,401-725
Ligand binding site information :
Structure ID Residues
LAN_12_096,PF13423,401-725 102,15,167,18,184,19,22,225,226,227,228,229,230,241,253,254,257,282,283,284,285,286,287,288
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_12_096,3.30.420.10-FF-000028,800-997 808,809,811,812,814,815,823,826,828,829,861,863,864,865,867,869,870,958
LAN_12_096,PF13423,401-725 1,2,4,5,6,10,56,58,59,60,61,299,303,306,317,318,319,320,321,322,323,324,325

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