Glaciozyma antarctica protein structure database

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Protein ID : LAN_12_068
Category : putative
Original description : Putative SF3B1 family protein
Sequence : MSDNTADEIRAAQQARREKRQATGSTQRSEADNDKTSLMGTSLDSDIYESGTGSRFANHDLSIDVGGGGGMDEDV
DDEGNSAAPVRLLDSFTAPKHLLNEFADDDAEDPFAATAKNRQITARQGEYHARRFDRETGVRVDAFAAAVEGDE
STSTGGEAMGYGDAMRATALEREEQRVKRAIEKQQEEGVDAEGNDLKQLEAPDETPRRKRWDVEPERPDAVMKEI
TSGRGGEWDDASTASKDVVVKKKRSRWDETPVGTTSSTAPGEAPKRSRWDQTPVGGSVATPMAMQQFGMTPVGGM
GMIQMGGPVIDARNRYLSDEELNTLLPTEGYEVIEPPAGYAPIRTPARKLMETPMAAGAGGFMMQEDGSSGAMAQ
MSEELPTDIEGVGDLAFFKKEDAQYFAKILGDQDESGLTVEELKERTIMRLLLKVKNGTPPMRKTALRQLTDKAR
QFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LSKAAGLAHMISTMRPDIDHADEYVRNTTARAFSVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIIQQIAIM
MGCAVLPHLKNLVEAVAQGLEDEQQKVRTMTALCIAALAEAAAPYGIESFDSVLKPLWTGIRKHRGKGLAAFLKA
IGFIIPLMDPEYANYYTIVVILILIREFQSPDQEMKKIVLKVVKQCAGTEGVQPAYVKKEILPEFFKNFLVRRMA
LDRRNYSQVVETTVELAQKAGVSEIVGRLVNDLKDESEPYRKMVMEIITKVVAGLGAADIDERLEVQLIDGIIYA
FQEQSIEDQVMLEGFGTVVNALGVRVKPYLTQIVSTILWRLNNKSAKVRQQAADLTSKLAIVIKQCEEDSLLSKL
GVVLFEQLGEEYPDTLGSIIAAIGAIANVVGMTQMSPPVKDLLPRMTPILRNRHEKVQEASINLIGRIADRGAEF
VSAREWMRICFELLDLLKAHKKAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLRVQERQSRVCSTVAIAIVAETCG
PFTCIPAILNEYRTPELNVRNGCLKAMSFLFEYIGEMGKDYIHAVVTCLEDALTDRDLVHRQTAASIVKHLALGT
AGLGNEDAHQHLLNLIWPNVFETSPHVIGAMLEAIEAMRIALGPGIVLAHVLQGLWHPARKVREVYWQIYGSLYM
GAQDALVAFYPSLPDLSDERNLYEREVLFMWI
KEGG Ontology ID : K12828
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.25.10.10-FF-000810 Splicing factor 3B subunit 1 417-752 N/A
FunFam 1.25.10.10-FF-000088 Splicing factor 3b, subunit 1 979-1225 N/A
Pfam PF08920 Splicing factor 3B subunit 1 246-367 N/A
Gene3D 1.25.10.10 Leucine-rich Repeat Variant 765-978 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_12_068,1.25.10.10-FF-000088,979-1225 FunMod -0.93206 2.194 Splicing factor 3b, subunit 1 LAN_12_068,1.25.10.10-FF-000088,979-1225
LAN_12_068,1.25.10.10-FF-000810,417-752 ColabFold 93.7 1.916 Splicing factor 3B subunit 1 LAN_12_068,1.25.10.10-FF-000810,417-752
Ligand binding site information :
Structure ID Residues
LAN_12_068,1.25.10.10-FF-000088,979-1225 1006,1010,1013,1014,1015,1017,1018,1019,1020,1021,1022,1037,1040,1041,1044,984,985,988
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_12_068,1.25.10.10-FF-000810,417-752 1048,1173,1174,1176,1177,1180,1181,1182,1183,1184,1187,1188,1191,1194,1195,1196,1206,1207,1208,1209,1210,1211,1212,1213,1214,1215,1216,1217
LAN_12_068,1.25.10.10-FF-000088,979-1225 228,268,269,270,271,273,274,275,277,278,329

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