Glaciozyma antarctica protein structure database

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Protein ID : LAN_12_059
Category : putative
Original description : Putative ATP-dependent DNA ligase
Sequence : MPPKRPQDTAGAAPQAKKSKPAQPSLASFFSPPSKPKASTSSSKPGTGSQEEEDAKFARELAKSEGIDLEALRKE
ERWREQQQGKVKREVPTVVLSDGSDDDDDDVVVVESSGSRASTSFRRPEATPPLPRAHPSKPTDPSPHRTPVLSS
TQTPSNQASFFAPSPSTSTNTSNLASKPLDTSIFTFSPATDVDTSSWPQHRIPFSFLVNEAFVPIAATKSRLTIL
RILTNLLRVVVELDPASLLQVIYLTTNRLGPPHKKDLELGIGSQVLGKAIRDVSGLSAAALKSLWSKLGDVEDRP
TPLPLPLRLVCHSVYTTLVALTKLKGSGSQASKTTFVKRLLVASQGEETRFVVRILAQNLRIGAVWARHPDYSHI
AAALLSSGLHNLSTLVPLAVGTPLQPMLGSITRSLSDIYTRLSSRPFVAEAKLDGQRGQIHVSLEEPVGESGKGV
WYDGKREGEARIWARVFSRNLEDMTDKYPDLLPTLSAIMARESTGEHPLTSFIIDSEICAIDPITGALRSFQELS
YRSRKDVELGEVKIRVGVYAFDLMFLNGESLLAEPFRRRRELLRTRFGPLLPADPRFAKWELVPCSEENEPDKVQ
AFFQETLTMRAEGIMVKLLDEVEVDDDPDVDAESDSPTKAKRPNRKTLPASYEPDKRADSWLKVKKDYLDDLGDS
LDLVPLGAWHGSGRKSKWWSPILLGCYDEETGGWSAVCKVMSGFSDAFYKDLYARFAPDSESTSRTCFPGVDAEG
LTPAIWFKPSEVWEIRGADFTLSPVYPAARGIVNFERGISVRFPRFIKIRDPADKGIEQATSAWQLAEMYRKQGE
CRRRFESGRGGGGGGG
KEGG Ontology ID : K10747
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF04675 DNA ligase N terminus 203-364 GO:0003677, GO:0003910, GO:0006281, GO:0006310
Pfam PF01068 ATP dependent DNA ligase domain 452-619 GO:0003910, GO:0005524, GO:0006281, GO:0006310
Pfam PF04679 ATP dependent DNA ligase C terminal region 691-801 GO:0003910, GO:0006281, GO:0006310
ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 425-433 GO:0003909
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_12_059,2.40.50.140-FF-000062,670-832 FunMod -1.36362 2.655 DNA ligase LAN_12_059,2.40.50.140-FF-000062,670-832
LAN_12_059,PF01068,452-619 FunMod -0.38562 3.048 ATP dependent DNA ligase domain LAN_12_059,PF01068,452-619
LAN_12_059,PF04675,203-364 FunMod -1.18927 2.746 DNA ligase N terminus LAN_12_059,PF04675,203-364
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_12_059,2.40.50.140-FF-000062,670-832 684,685,695,696,714,716,717,755,792,793,794,795,797
LAN_12_059,PF01068,452-619 456,458,460,461,462,465,467,503,505,544,546,547,549,550,557
LAN_12_059,PF04675,203-364 203,205,221,222,223,225,226,228,229,232,243,244,245,247,248,250,251,252,253,308,309,310,312,313,361,362,363,364

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