Glaciozyma antarctica protein structure database

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Protein ID : LAN_11_491
Category : putative
Original description : Putative helicase 
Sequence : MPVPFTDEVRHQVLKDLGVGKLPSPAEIKEELEREWLRPSPGGRKELSGIEWAMHWDRPTALRDLLHVEPTFPTT
SLEFRSAGLDGAITGYKEVSRTAVLRTALNSTSVERAPSSYVSSFVRGKSSYFPFRPGGLGDLVLGEEGDGLEGM
AEGLEKAFEKGRGGIRTIPPGFIRGLDFGPLGDGAEGALMDEEEEVEVTPIYRLMLEITSDGRTTAVLHGRPPPA
AAAPQLDSTIEDLLPSRRLLKAPASTSARRRPVVAKRDWAHVVDVNREIVNFRELVPDMAKEYPFELDTFQKEAI
YHIEIGESVFVAAHTSAGKTVVAEAIYTSPIKALSNQKFRDFSHTFPPSSVGILTGDVQINPEASCLIMTTEILR
SMLYKGADLIRDVEWVIFDEVHYVNDLERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS
TPKRPVPLEHFLYSGKELHKIVDAKGQFLSQGYKEAGESIRRKQDKDREAAGIAPPVRGGSTRGGAPGIRGAPRG
GQNRGGGGQARAVAARGQAAARGGGGGRNVQGRDATLWIHLIGLLKKKELLPVVVFTFSKRKCEENAASMPNTDL
CSAAEKSEVHIAIERSLTRLKGSDKKLPQITNMRNLLGRGIGVHHGGLLPIVKEIVELLFARGLVKVLFATETFA
MGVNMPAKCVVFSGTRKHDGRTFRDLLPGEYTQMSGRAGRRGLDKTGTVIIVADSEVPDTPSLTHMLLGQPTKLQ
SQFRLTYSMILNLLRVEALRVEEMIKRSFSENAAQRLLPEHQKKFTEGESELKALKKLTPGPKTDEMKRFYDLSL
RIVDLNTAVLEGVLSHPAAAKNLATGRIVVLSDGHFRDNPAVLLKAAPLAVSSSGVIDTMKQFFVLAFVPQAIRA
KTNDVAHDSVPPRWPPCPQQLSADELTYELAIVPLTSISLVTSSTMKVDAEAISDRLRRSLMENALAEFVALSSN
GVPLQEADWSKVRGLEFREALGERDRLVGEVGFLEVDVEDPAFVESYQTLHGERVLQEKIAGLRMTLSEQNLELL
PDYEQRIEVLKELQFIDENSTVLLKGRVACEINSANELVLTELILENVFAAYEPVVVVALLSCFIFQEKTDVEPL
LTPKLEEGKATILEITERVRAIQTRHRADFSEDGFNNDLKFGLVEVVYEWAKGMAFSQITALTDVQEGTIVRAIT
RLDETCREVRDAARIVGNADLFTKMEQCQLKIRRDIVFCASLYQR
KEGG Ontology ID : K12599
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF17911 Ski2 N-terminal region 54-181 N/A
Pfam PF00270 DEAD/DEAH box helicase 295-431 GO:0003676, GO:0005524
Pfam PF08148 DSHCT (NUC185) domain 1070-1238 N/A
Gene3D 1.20.1500.20 G3DSA:1.20.1500.20 780-863 N/A
SMART SM00490 helicmild6 628-717 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_491,1.10.3380.30-FF-000001,1020-1244 ColabFold 88.62 2.188 Ski2 ATP-dependent RNA helicase LAN_11_491,1.10.3380.30-FF-000001,1020-1244
LAN_11_491,3.40.50.300-FF-000354,256-454 ColabFold 87.3 2.277 ATP-dependent RNA helicase SKI2 LAN_11_491,3.40.50.300-FF-000354,256-454
LAN_11_491,3.40.50.300-FF-000987,455-750 ColabFold 84.1 2.355 DEAD/DEAH box RNA helicase LAN_11_491,3.40.50.300-FF-000987,455-750
LAN_11_491,PF13234,772-1043 ColabFold 91.38 1.691 rRNA-processing arch domain LAN_11_491,PF13234,772-1043
LAN_11_491,PF17911,55-180 ColabFold 77.12 3.26 Ski2 N-terminal region LAN_11_491,PF17911,55-180
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_491,1.10.3380.30-FF-000001,1020-1244 162,163,166,172,173,174,177,178,181,214,216,217,218,219,220,221,222,223,224,225
LAN_11_491,3.40.50.300-FF-000354,256-454 59,60,63,64,140,142,143,144,145,146,147,171,172,173,174,199
LAN_11_491,3.40.50.300-FF-000987,455-750 58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74
LAN_11_491,PF13234,772-1043 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,267,270,271,272
LAN_11_491,PF17911,55-180 78,79,80,100,103,104,106,107,108,109,110,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126

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