Glaciozyma antarctica protein structure database

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Protein ID : LAN_11_457
Category : putative
Original description : Putative RNA polymerase
Sequence : MKTLVADSTPKRIKHIQFSVLSSQEIVAISEFEANQRDLYKLEDRSPALHGVLDRRLGTSDKAGKCETCGHSLAD
CVGHYAYIKLVLPVFHIGYFRHCLGILQCICKSCSRILLDSAEHRRFLAMFRRPNLDTLTVASYSRQLTAQCRKC
TICPYCGDINGVIKKIGPMRIAHEKYRGRNRTKVPANNQGHRGQGTYDAWKESFTEAKMDMRELEAHIDKAIEDL
NPLKVLTLFKRIPPSDCELLGLDPSAGRPEDFLWQYISVPPVCIRPSVQQEAATNEDDLTVKLTEIIFMNAVIKT
GLAKGVTTQNLMEQWEFLQLAVATYINSELPGIPTAVRLKGKQGRFRGNLSGKRVDFSARTVISPDPNLEIDQVA
IPERVAKILTFPDRVTHHNIEVLRSAVRNGNEVHPGANFILQGGDDGFKKFLKFGDKDAMAEKLRVGDVVERHLR
DNDIVLFNRQPSLHKLSILSHRVKVRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARTEALQLMNIKHNLV
TPRNGEPIIAATQDFITGCYLLTRRDTFYDRAEFVQICSYLHDADLQIDIPHPTIVKPVRLWTGKQVFNVLMRPN
KQSNVLVNLECKNKTYEKPREGEFPDMSPNDGYLVVQNSEIMCGLMDKATVGDGNKKSVFAVIQRDYGPDEAASA
MNKMAKLCARWLANKGFSIGISDVTPGVALQAQKDELVHLAYEESNMLIEQARTGKLENQPGSNIDETLESMISG
TLSRVRDKVGEICMTELSRNNAPLIMATCGSKGSKINVSQMVACVGQQIISGHRVPNGFQDRSLPHFLKGSKDPP
AKGFVRNSFYSGLVATEFLFHAISGREGLVDTAVKTAETGYMARRLMKALEDLSSRYDRSVRSSTGGVVQFVYGD
DGLDPANLEGDGKPVDYTRTWSHAKYTKLNTSDVGLLPFEIMQLVDTEFASPYFTGACSPQFLADVRVYIDTFIV
QPAAKYRVAYGMPGALTKLPARTSPFGSATEAQKAVVNNKTKVTESQIRAFLQLCWTKYVRAKIEPGTAVGAIGA
QSIGEPGTQMTLKTFHFAGIASMNITLGVPRIGEIINAAKTISTPIISSALTIDTDERSARIVKGRIEKTYLGDI
ASIISGTYGDTHLFVTVHVDMKAIDRLQLEITLDSIRDSIVAAPKLKIGSGSVNVKKGVDQVQIFAHEDDGTASG
TAHRRLLELRRVLPGVVVKGIRGIARAVISEQPNKKKQLLVEGEGLREVMTTEGIIGEKTTSNHIMEVEKVLGIE
AARACIIREIDYTMSSHGLGVDPRHLMLLGDVMCYKGEVLGITRFGVAKMKDSVLMLASFEKTTDHLFQASFNGR
RDPIQGVSECIIMGNPANNVGTAMPALVSAKPVLPPLTTFLFERPENAKARRALVA
KEGG Ontology ID : K03018
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.10.274.100-FF-000005 DNA-directed RNA polymerase subunit 528-699 N/A
Gene3D 1.10.132.30 G3DSA:1.10.132.30 700-816 N/A
Gene3D 3.30.1490.180 RNA polymerase ii 385-447 N/A
Gene3D 1.10.150.390 G3DSA:1.10.150.390 1329-1374 N/A
Gene3D 4.10.860.120 RNA polymerase II, clamp domain 2-124 N/A
Gene3D 6.10.250.2940 G3DSA:6.10.250.2940 817-875 N/A
Gene3D 6.20.50.80 G3DSA:6.20.50.80 876-927 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_457,PF00623,352-519 FunMod -0.2195 Putative RNA polymerase LAN_11_457,PF00623,352-519
LAN_11_457,PF04983,523-699 AlphaFold2 90.53 Putative RNA polymerase LAN_11_457,PF04983,523-699
LAN_11_457,PF04997,11-350 AlphaFold2 88.85 Putative RNA polymerase LAN_11_457,PF04997,11-350
LAN_11_457,PF04998,837-1328 AlphaFold2 85.84 Putative RNA polymerase LAN_11_457,PF04998,837-1328
LAN_11_457,PF05000,726-830 FunMod -0.40443 Putative RNA polymerase LAN_11_457,PF05000,726-830
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_457,PF04983,523-699 359,458,459,460,461,462,463,464,465,466,468,469,485,486,488,489,490,492,493,494,495,496,501,503,518
LAN_11_457,PF04997,11-350 15,16,17,18,19,20,23,24,126,162,166,167,168,169,170,171,172,173,174,175,176,177
LAN_11_457,PF00623,352-519 1,2,3,4,5,6,7,8,9,11,258,259,328,329,332,334,335,336,337,338,339,340

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