Glaciozyma antarctica protein structure database

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Protein ID : LAN_11_419
Category : putative
Original description : Putative splicing factor
Sequence : MHLLNYSLLQSTAITAACAGQFSGTKAQEICVSRGGTRIELLRTDAQTGKLESVAEAEVFGTIRSLSAFKLTGGA
KDYIIIGSDSGRIVVLEYDPETNGFNKLHQETYGRSGSRRIVPGQHIATDPKGRAVMIGAMEKSKLVYILNRDAA
ANLTISSPLEAHKQRAIIHSMVGVDVGFENPLFAALEVDYGESDQDPTGEAFKAAEKMLTYYELDLGLNHVVRKW
SEATDPRANLLVQVPGGQSGSSDKFDGPSGVLVCAENYIIYKHQGAKEHRVPIPKRASPLSDPERGLIIISAVMH
KMRGAFFFLLQSEEGDLYKVTIEHEDEEVQALKIKYFDTVPVAASLCILKSGFLFVASEFGNQYLYQFEKLGDDD
DETEFSSADYEDFGAGRDPLPAATFRPRPLDNLVLADELDSLNPIIDAKVANFLGEDTPQIYTACGRGARSTVRI
LRQGLEVVEAVGSELPGAPIAVWTTKLKADDQYDAYIILSFVNGTLVLSIGDTIEEVSDTGFISSAPTLGVQQLG
EDALLQIYPRGIRHILPDKRVNEWKVSPGQTIVCATTNKRQVVAALSTQEIVYFELDLDGQLNEFQERKEMGVDI
LTMSIAEVPEGRQRTPYLAVGCADSTVRIISLDPDNTLETLSLQALTAPPSSIVVAEILDASIDKFHPTLFVNIG
LQNGVLLRTVLDAISGQLTDTRTRFLGSRPVQLTRVPIHGSPAILALSSRSWLNYTHQNILQFTPLIFDTLDHAW
SFSADLCPEGLIGITGNSLRIFTFPKLGSKVQQTSIPLSYTPRKMITSPSNKLLYVIEADHRTLSPQAQKIILDE
KVAAGEEIDHEVVELPFETLGLPRAAAGNWASCVRIIDAVEATTIFKLDLEDNEAAFCVAIVPFHTNKDELFLVV
GTGQDTLLQPRSCKSGFLNTYKILEDGRSLELHHKTETDDVPTALMAFQGRLVAGVGRALRIYDMGKKKLLRKTE
NKSFATMITTLNTQGSRIIVGDIQESIHYAVYKAPENRLIVFADDTSPRWTTATTMVDYETVAAGDKFGNVFVNR
LPKSVSDEVDDDPTGAGIMHEKAYLMGAPHKTHMLAHYHVGDIITSIQKVSMVAGGRDVLLYTGLMGTVGVLVPF
VSSEDVDFFSTLEMHLRTEAPSLVGRDHLAYRGAYAPVKGVVDGDLCNQFALLPMQKQAQIAQELDRTTAEVLKK
GETAAGNSW
KEGG Ontology ID : K12830
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 2.130.10.10-FF-001143 Pre-mRNA-splicing factor rse-1, putative 13-384 N/A
Pfam PF03178 CPSF A subunit region 856-1176 GO:0003676, GO:0005634
Gene3D 2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase 455-780 GO:0005515
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_419,2.130.10.10-FF-000628,763-1120 ColabFold 93.5 1.864 Pre-mRNA-splicing factor RSE1 LAN_11_419,2.130.10.10-FF-000628,763-1120
LAN_11_419,PF10433,77-605 FunMod -0.16584 2.938 Mono-functional DNA-alkylating methyl methanesulfonate N-term LAN_11_419,PF10433,77-605
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_419,2.130.10.10-FF-000628,763-1120 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,281,283,325,326,327,328,329,331,339,340,341,342,343,344,349,350,351,353,354,355,356,357,358
LAN_11_419,PF10433,77-605 455,456,457,458,459,460,461,462,463,464,472,474,483,484,485,487,499,500,501,502,503,504

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