Glaciozyma antarctica protein structure database

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Protein ID : LAN_11_397
Category : putative
Original description : Putative WD repeat-containing protein
Sequence : MDVSPVGGSPAPGAGEERGEKEADKAKKRSASPGTSTSPTVVRKPLPLTSALPPPATTSTSISSAFPTPTLPITA
PTFPLPSTFASLAKVKAEEALSLAKLPPPIDMTNVIVLLSDDGGVVRLRGHTMPKVQPCSWNPKVGAMLATGGGD
STCRIWDVPPPGKRGAKIGRVMKENVVCKHSSAQRRADVAAVAWNPSGSLLATGSEDGIARIWTPSGDLHLVLSM
HQRTIFSLKWNNAGTMLLTGSLDNSVCLWELNTGKVKQQWSTHSDSVLDVDWNDDQTFASASMDKSIHLFSISRV
SPVHRFKGHRDEVNVVKFSPCGTLLASCSDDHTIRLWSLRNIPGLALGNKVTAREEGRLIDDEDNSGVLVLEGHS
RDVHTIAWGPWKKGSEGQRLLASASFDGTAKLWDAETGACLHTFARHTDFVYSLGFSPGAGTWLATGSNDGKMCV
WHVKERKLVMEYEHAGPIYEIAWHPDGTQLAPFEVEAAEDVPSSNTQHPLAEYWTPPPSDIFHSPDALPTVREGN
FFPENDYDLIAPAPRFRQDGRSSRPVSYAGSTSSSTRGRIELGGPHHESRKMDRHASVQDVNALAQEELNDEAES
DGGKRLANPYSWERPLDTVNRLSRVWDATPVPMAAVDRRASRLPPGVMLLDPFGMAVSSEVSPYDSALQYSASPY
TPARSRASFYPPTSVSLGASNSYQSSSGLSAMSASTGSYPSSSAATSPLPWNGSDLSVNGGTLGAPWQKKQRSAS
LGETGNGGRSRGSFLAARNGYAGASGPSKLSGEIEADTSVDAASLAALESGIPPDLMGIIPGDQDYINSKLYQRT
LKAQKALDKERRKLAARGPKSFDQDLKLHTRPSSQSFTSDSPSISSGGGKKRHSLGWFRSRSEIALPISVPVTPP
LPSSATFNRNQRHSGPTFSSRHPPTSATVPKDQHGSFNAARSPKQSNEEEVLAHHQRQQLVVPPPLPISGLPLHS
RSAPPTLSSQDTTPRSQLTPTSNGRSTSASNGTVTPPSTLGNSVAAAATVPLPPSPRVDEFPSSRNPLDASRPVS
PHGPPQNRPQHLRRRKDRKNRRFLPPKIRPHRPRAPRAKTHQPSFPPGAAAPTAHTVYQQSAPRKSKSSLNMFFS
RGRRESESEQANQYQMRGASNSTTSTTATSPPPPAKRTAITKPKKEGMSFFERAKKTLLAGSEPPPRSPSTAPSQ
RPLQATAARPPISLPPALPLPRLPPHALPPPPSPTTAKLSKDKPAKGSFFGAFTRPRTQSSSTPPAPSASKVLPP
PPAPTPPSTTSGQRPGRELPPPRKASLPEGSDERKVANGPARPVDNLSNFPPKQQHANNLSSSPHVDNLSNFPPK
PHVDALSNFPPKQHERPVDNLSNFPPRNATAYA
KEGG Ontology ID : K04508
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00400 WD domain, G-beta repeat 302-338 GO:0005515
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 144-158 N/A
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 242-256 N/A
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 396-410 N/A
SMART SM00320 WD40_4 175-214 GO:0005515
SMART SM00320 WD40_4 258-296 GO:0005515
SMART SM00320 WD40_4 412-452 GO:0005515
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_397,PF00400,183-213 AlphaFold2 85.23 Putative WD repeat-containing protein LAN_11_397,PF00400,183-213
LAN_11_397,PF00400,413-451 AlphaFold2 94.99 Putative WD repeat-containing protein LAN_11_397,PF00400,413-451
LAN_11_397,PF00400,369-409 AlphaFold2 92.48 Putative WD repeat-containing protein LAN_11_397,PF00400,369-409
LAN_11_397,PF00400,141-157 AlphaFold2 74.37 Putative WD repeat-containing protein LAN_11_397,PF00400,141-157
LAN_11_397,PF00400,302-338 AlphaFold2 97.02 Putative WD repeat-containing protein LAN_11_397,PF00400,302-338
LAN_11_397,PF12894,225-279 FunMod -0.82077 Putative WD repeat-containing protein LAN_11_397,PF12894,225-279
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_397,PF00400,183-213 1,2,3,4,5,6,7,8,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31
LAN_11_397,PF00400,413-451 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,30,32,36,38,39
LAN_11_397,PF00400,369-409 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,24,25,26,27,28,31,33,34,35,37,39,40,41
LAN_11_397,PF00400,141-157 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17
LAN_11_397,PF00400,302-338 1,2,3,4,5,7,8,9,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,27,29,30,31,32,33,34,35,36
LAN_11_397,PF12894,225-279 225,227,228,229,230,231,233,235,236,237,238,239,241,242,243,247,248,249,251,253,254,256,263,264,265,266,267,268,269,270,271,273,274,275,276,277,278,279

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