Glaciozyma antarctica protein structure database

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Protein ID : LAN_11_225
Category : putative
Original description : Putative DNA helicase
Sequence : MSAVASGSGSAKAPPAAMFGGAKGKGPANGNGAEDPVAYELPWVEKHRPRTLGDIVGNVETIERLKVIARDGNCP
HIIISGSPGIGKTTSILALARALLGDNYKEGVLELNASDERGIDVVRNRIKTFAQKKVTLPQGRHKLVILDEADS
MTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPIQSRCAILRYSRLSDQELLKRLLEICELENVPHNEAGLTA
LIFTSEGDMRQAVNNLQSTYSGFNFVGAEEVFKVCDQPHPVKVQALINSCIKGDIDNAMSKLEDLWRQGYAAVDI
VTTLFRVVKGMDAIAEYTKLEFIKEIGFTHMRILEGSSRQSTRPKRYADELYEDQQAMLAANGGSLDGNMAYDAA
FSNSGRPSNGQYLPRAPNGMGEDEAVDSDEEGGGLLRATAHIWRDPLQSYVLALHAKKQVVEEDWEANEQSRKFV
TAARVVETSEKRIVEMRERKEVRLVELRVEEENRIKEEHEAATRAEREEEKRLAKEKDKEERLRKQREASRKKRD
EDRAKKEREDESRRARAEEARLAKIQEAERKAALTPEEREAEDKILLEKQQRDREEALAKARELEDELLGAAEGR
GARKKRRTEGSALEEEAAKALSGLGGGFGRYTETDFDELDELEGEYQEPGPSRSRSSKSKARPRQSGGYDYGYGA
PPHGYYPPGPPYAPYPYPYPPPVALPPDAYVGPDGQYYDSHGQHIPFTPYPPPPGYGGPGDHAYGPPHGYPGPHY
GYPPEQGEMDDYAGEEGDEGDEDLPMTGKGSRNPKVLATKRWRVIEEHERRVWTQIAKRDIPKAIRVAQQSTSSR
LFFSKRLSTIVAREARRAAQRTKGVKDVQTRAKKVMREMLVFMKGNEKKERESRKKAEKEALDKAKKEEEVREAK
RAARKLNFLITQTELYSHFVGNKIKTSEAEDSADTAGAAPAPVPQKSASLLAAIAAGDAPAGAELKELDFDIDDE
DNVAQHARRNAQAAVDAAKNAAAAFDAAAGEGGVAASAKAAQGLNFDSEDMNFQNPTSMNGDVQVTQPKLLTCTL
KEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISLMAYLAEVHNIWGPFLVIAPASTLHNWQQEISRFVPGL
KALPYWGNTKDRAVLRKFWNRKSLRYDKDAPFHILVTSYQLVVQDEKYFQGVKWQYMVLDEAQAIKSSTSARWKT
LLGFRCRNRLLLTGTPIQNSMHELWALLHFIMPSLFDSHDEFSEWFSRDIEGNAEKNGAMNEHQLRRLHMILKPF
MLRRIKKNVQNELGDKIEIDVYCDLTPRQKVMYRTLRENISITDLVSRAQRLNDDDSVKRLMNLIMQFRKVCNHP
ELFERADVTAPLAFASFNRTANLIRDSDVLEVPYATKSVIEYRVPKALYRGGLMLAVPGPNSNAGSDTLNLNKLM
NIWTPEHIQRSLSADEPTFAFARGLNLSPAEVSKSVKSHGIIRVGLALDRINSSRARHEYDAIRDPSSTLSSTPL
SLDIPSKSSSLPFDQSWRARGLIPLGEVEQNYRATSRLAKPDARFYMDKVVAPAINAVCNDRSFIYDQENERFDP
LFSAALFGLPTQDSQADIDRFEAALPGFPAQGVLAASSRAQLPFPPMQVPQLRKLILDSGKLAKLDALLNELKAG
GHRVLLYFQMTRMIDLMEEYLAFKQYKYLRLDGGSTISERRDMVMDWQTKPELFIFLLSTRAGGLGINLTAADTV
IFYDSDWNPSNDLQAMDRAHRLGQTKQVTVYRLITKDTVDERIVQLARNKKLVQDAVVGSSSATPNEGGSAKTNE
VVSLLLGEDELEEGLRQAELKRKRAEEKAIEDGRRGAKTREENKKSKEAAAIAAAAEAAKKKAAGVSSWADDEED
AFSFFTNPANGGTADDDDGQPIDGADTPVKKPPRKRAKKVDDGEPTKPKPKAKRAPRKKKEPVAKASEPALV
KEGG Ontology ID : K11665
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd00009 AAA 56-192 N/A
CDD cd18140 HLD_clamp_RFC 198-260 N/A
Pfam PF08542 Replication factor C C-terminal domain 263-338 N/A
Pfam PF13892 DNA-binding domain 796-926 GO:0003677
Gene3D 3.40.50.300 P-loop containing nucleotide triphosphate hydrolases 1295-1384 N/A
SMART SM00487 ultradead3 1046-1245 N/A
SMART SM00490 helicmild6 1665-1748 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_225,1.10.8.60-FF-000012,199-262 FunMod -2.18644 Putative DNA helicase LAN_11_225,1.10.8.60-FF-000012,199-262
LAN_11_225,3.40.50.300-FF-000107,35-198 AlphaFold2 90.1 Putative DNA helicase LAN_11_225,3.40.50.300-FF-000107,35-198
LAN_11_225,PF00176,1063-1352 AlphaFold2 83.38 Putative DNA helicase LAN_11_225,PF00176,1063-1352
LAN_11_225,PF00271,1636-1748 FunMod -1.67216 Putative DNA helicase LAN_11_225,PF00271,1636-1748
LAN_11_225,PF08542,263-338 FunMod -1.12349 Putative DNA helicase LAN_11_225,PF08542,263-338
LAN_11_225,PF13892,796-926 AlphaFold2 93.89 Putative DNA helicase LAN_11_225,PF13892,796-926
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_225,3.40.50.300-FF-000107,35-198 204,205,206,208,209,210,212,213,214,215,216,217,233,234,235,236,238,239,242,243,245,246,247,248,249,250,252
LAN_11_225,1.10.8.60-FF-000012,199-262 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,20,49,50,51,52,54,55
LAN_11_225,PF00176,1063-1352 14,15,16,17,152,216,217,218,219,220,221,222,223,226,227,228,229,230,231,232,233,234,235,236,237,238,239,240,243,246,279,281,282,285,286,287
LAN_11_225,PF13892,796-926 1636,1637,1659,1660,1661,1663,1682,1711,1715,1725,1726,1727,1728,1729,1730,1731,1732,1733,1734,1735,1736,1737,1738,1739,1741,1742
LAN_11_225,PF00271,1636-1748 269,271,272,273,274,275,278,279,280,281,282,283,284,285,287,288,291,292,298,299,300,302,304,305,309,322,328,331
LAN_11_225,PF08542,263-338 106,107,109,110,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126,127,128,129,130,131

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