Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_11_036
Category : putative
Original description : Putative ABC transporter 
Sequence : MSALSTSPLPPLFLLSSSLFASAYLFHSRPSTTPKPHHIPDLEADPTAFYPRLRLRKLALVGVLLLLEAETLFRT
MWDAGRGEGGRVLLENGVMAGFWGITLILAILSLPLSNSASSIDRHWSYTVTLTVLTLASLTSTVLRLVLPNSTT
HRPSDIPLLSTTLAFLSLVPQLLAFLLAGSTPRCAPLIHPTSSRPVSALTSCSPVSYILFSWISPVLEVGAKVES
LAETDLPVLGANDRAENLWERIQEPSKPGPKWVNKLLWRVLVVNRRLFYWQSVLALVTAFLYYLPAFFLQKFVAF
LEHPPKRAPGDDEPRSLAWGYAFCLGLLVAALLDAVVGGQLWFVSNSMLATRLRTQLNCLIFDKTLKRKDIAGVA
AAQKPDSDVGTPEEEEAKVSQSTGMFDFGKPDENFGSKSQVLNLFTIDVDRVADFSVWCFSIIDAPAEIIIGTFF
LYKLLGYAAFVGIGVAVLFLPLNHWTSKAFASVQDRLRVSLMNEVLQSVRMIKYMAFETPFEERILVSRGEELKH
LRHNFLLEVSFNAIWSASPILCVLVSFYVFTKIMGQELTPSVAFASLAVWNELRFALNIIPDILVQAIQCLVSLR
RIEKYLDSDEVSPVTLEDSPLVDVSTQEVAFRSATVTWPANVDVRKTPAAGTQTPANQFQLQDISVDFPVGKISL
VEGSLGSGKTLLLLALLGEADVLAGQVLCPHSSPDAISLPNIEWDRLLNDENWVQPSRTAFVPQSAWLQNASIRD
NILFGLPYRHERYRATLEACSLVTDLEILEDGDETEIGEKGINLSGGQKARVSLARAVYSRASLLLLDDVLSAVD
AHTAQHIFNECLKGPLMKQRTIVLVSHHVQLCAPGVDYVVSLENGRIKFEGTSATFLASPRFKVPDEEEEPVETI
LVKSPTKPKNKALDLVAAEAPSEASSASEAESESESEEEEEEEMEKPARKLVEDETRAVGRVGWAVWRLYLGLCG
GVFFWIVFVISFGGTKLADVATTFWLNIWAGSYDAPDDGRVERTVNYYLGVYALLSVLSVFVGTLQWFILYAGSL
RASDRLHRLILHSILRAPLRFFDSQPLGRLLNRFSKDLEGIDASLPDHFGRTLMYGISLLTTLAVVASVAPTFLI
GFAILSIGYVHHARLFSQTARELRRLDSVSKSPLYSIYGEAIAGVAVIRAFGSSQRFMSLMLDRCSTNVTFYWYL
WSVNRWLSIRFALLSAVVVALTGYVLLAAGNKIDAALAGFALTFSLNVANDILFLVRRYTALELAMVAVERIKEY
AEVEQEGAEIVEPRPATHWPHAGEIHVENLSIRYAPELPDVLHELNFSIAPSQKVGIVGPTGCGKSTLALSFFRF
VEAWSGRIVIDGIDIATVGLKDLRTKLTIIPQDPTILSGTLRSTLDIFNEYTDMEIFDALRRVHLIRAENDPRHP
DAADGANRSPFYNLDGEVSEGGGNFSQGQRQLLCMARALLKRNRVLLLDEATASVDYETDEMISATIRQEFSEST
LLVIAHRLRTVIDFDKILLLDAGKIVEYDSPSALLANPASRFYALCRASGKSEFRILKKMADGKKKATTKPRKLV
RRTTSYKVPKTSASYKD
KEGG Ontology ID : N/A
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00664 ABC transporter transmembrane region 413-573 GO:0005524, GO:0016021, GO:0055085, GO:0140359
Pfam PF00664 ABC transporter transmembrane region 983-1230 GO:0005524, GO:0016021, GO:0055085, GO:0140359
ProSitePatterns PS00211 ABC transporters family signature. 794-808 GO:0005524
ProSitePatterns PS00211 ABC transporters family signature. 1450-1464 GO:0005524
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_11_036,1.20.1560.10-FF-000013,944-1282 ColabFold 90.6 2.24 ABC transporter C family member 2 LAN_11_036,1.20.1560.10-FF-000013,944-1282
LAN_11_036,3.40.50.300-FF-000825,625-895 ColabFold 88.44 2.37 ABC bile acid transporter LAN_11_036,3.40.50.300-FF-000825,625-895
LAN_11_036,3.40.50.300-FF-001354,1284-1547 ColabFold 88.44 2.37 ATP-binding cassette (ABC) transporter, putative LAN_11_036,3.40.50.300-FF-001354,1284-1547
LAN_11_036,PF00664,413-573 ColabFold 87.4 2.032 ABC transporter transmembrane region LAN_11_036,PF00664,413-573
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_11_036,1.20.1560.10-FF-000013,944-1282 39,94,96,97,100,101,103,149,206,209,210,213,214,215,216,217,218,220,221,223,243,244,247,248,250,251,252,254,255,258,259,263
LAN_11_036,3.40.50.300-FF-000825,625-895 61,112,114,115,116,117,118,120,164,165,169,171,172,173,174,175,176,177,182,199,200
LAN_11_036,PF00664,413-573 7,8,10,11,12,14,15,16,18,19,20,21,22,23,24,25,26,27,28,29,30,32,33,34,36,37,48,51,55,58,62,65

Footer