Glaciozyma antarctica protein structure database

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Protein ID : LAN_10_124
Category : putative
Original description : Putative tRNA pseudouridine synthase
Sequence : MSTSKRPSDAPAGDNVSTPAKRSKTGGESTAAALPKLSAEEGASSPAVTRDTDSPSARGNRGGRGDRGGRGRGGD
KRGGRGDRRGGRGGSDSRSWGGRSDNAKGDEKKERLPKKKVAVLVGYNGLGYSGSQINPGVETIEGDVFKAFIKA
GAISEDNSNSPQKVGLARAARTDAGVHAAVNVISLKLILSPPNLPADTSLETYINSFLPPTIRLWSFIRVQGSFN
PRTLCDQRHYEYTIPTHMFLGPKPGTSMDLWLQKSRATTVTPSAAIAPVAQAASGSPLIEEVKLPAAPTALETSA
AAAIADSDKFWAAQTKDSVFADDLAAKRAWRISEGLLASIQEFFKAYEGSHNYYNYTVAKDFRDRSCQRVMKKLD
VSTPFVVNGTEFVSVSFLGQSFMLHQIRKMIGLAILAVRTSTTPLPRPPETFGPSRIHVPKAPGLGLLLLEPQYL
EYNKRVDESNKKLLMLQSEGRIKEQEVNEQMRDPVEIGTLLDKVDGFKKVEIYKKMWEVEEKDAVFSQWLNYLDV
YIGPDFEYLNSKGIIPQTAVFKKGENPEKTRLPAGAVAVEGDAAAPIEEEEDVAGEEEG
KEGG Ontology ID : K06173
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 3.30.70.580-FF-000002 tRNA pseudouridine synthase 105-230 N/A
Gene3D 3.30.70.660 Pseudouridine synthase I, catalytic domain, C-terminal subdomain 231-528 GO:0003723, GO:0009982
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_10_124,3.30.70.580-FF-000002,105-230 FunMod -1.09668 Putative tRNA pseudouridine synthase LAN_10_124,3.30.70.580-FF-000002,105-230
LAN_10_124,3.30.70.660-FF-000002,307-534 AlphaFold2 90.48 Putative tRNA pseudouridine synthase LAN_10_124,3.30.70.660-FF-000002,307-534
Ligand binding site information :
Structure ID Residues
LAN_10_124,3.30.70.660-FF-000002,307-534 1,100,103,104,107,108,132,134,135,136,137,139,193,197,200,201,204,21,210,211,214,22,24,26,34,38,4,5,71,74,79,80,81,82,83,8
4,86,96
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_10_124,3.30.70.660-FF-000002,307-534 123,125,131,132,133,134,135,136,168,169,170,171,172,173,174,175,176,177,179,180
LAN_10_124,3.30.70.580-FF-000002,105-230 83,84,85,86,87,90,91,94,96,97,100,104,108,127,132,133,134,135,136,137,138,139,140,141,142,143,181,184,188,191,192,196,197,210,213,214,215,216,218,219,220,221,225

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