Glaciozyma antarctica protein structure database

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Protein ID : LAN_10_113
Category : putative
Original description : Putative ATP-dependent DNA ligase
Sequence : MADYDNPLPFSFFCDLLSAIQGVKPVRTGKRRAGDQPQESRTLENWIAKLRECHSPLPAGSGVLFFRLFFPEEGV
RRRYGLKEQTLCEKLESLSLGCLGAGVVRLLHEDYKPPLGPLTLGRVDQLLDELASFSDFSAPEVTALRRRGSAK
AFQARTTDDVLKDLFSTLMAPQLGFMIQIILRDLSPLLYTHPSQSGSIALRSYTSAAYHKIDLREAMAAWDKRMP
GLYRVTADLDIVARALEQPCYSNGGPAPQPTPIIGIPVQYPKSARPGTCSQATKNLQGPVAVETKYDGERLQIHI
DMSLLYDHQITIRSKSGRNSTETRHLLLPIIRASLGLPLLPSTVSDSRLSLRTRSSYPYAPNLSRLILEGEMIPY
NEDDSRVDEFWKLAAVKHGTMPAGQMEESQESVETGGTSSPAGISMGRWWKQAEVLPPLHLAIAWFDLLLVNEES
LLDCTYAERRARLESLVRPIHGFSMLAEREIINFDHKPTALHDLRLRFAHNIADRGEGLMLKPLFSRYNDWGNQR
WIKLKKDFIPGAGDTMDFEVVGASWQVKRARELLVPTSIFTTFFIGMRADHLSTSFGRDRKPHYHILFTTSYGLT
REKLEVLCHSIRLNQPEYFEVPHPTRPNFKSTFKDERGKSHWPIYSSPCTTFTFSLADHLKAKAERPWYIFQSPR
IFELTGAGFQKSHGSPFYELRWARITKTSRPDPDVPSLDQLQKTAIEAMQGVDDDEARRKEEIWPSAEGSRRESA
EERVERERGEWVRRLERADGVLESAVDLGKGKGREMGDDESGRGEKRRKVGERQMVVVISDDNSTVASTSMLVAA
GVPFPTQASTSTRDSSPTPRPRPRIAKPSPPSVGPSPLPSLLDNLSPSLVVAKPPSPAQLPTPQPRALKRLITLV
PPPLPRTSLSLSVASLSSPPSSKFWSIYPPPSSSAPLNPRHPDLGPLNYLVDPTDVLWAAGWEVEGQGAYRGAKR
SGYVFVQEDEVAMVPMRAKRKGGEERVWVMEREGLEKMSAFGMEQFLLELL
KEGG Ontology ID : K10777
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Gene3D 1.10.3260.10 DNA ligase, ATP-dependent, N-terminal domain 1-247 GO:0003677, GO:0003910, GO:0006281, GO:0006310
Gene3D 3.30.470.30 DNA ligase/mRNA capping enzyme 262-529 N/A
Gene3D 2.40.50.140 Nucleic acid-binding proteins 533-723 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_10_113,PF01068,275-530 ColabFold 83.44 2.839 ATP dependent DNA ligase domain LAN_10_113,PF01068,275-530
LAN_10_113,PF04675,9-184 FunMod -0.74471 2.817 DNA ligase N terminus LAN_10_113,PF04675,9-184
Ligand binding site information :
Structure ID Residues
LAN_10_113,PF01068,275-530 111,135,136,137,138,14,15,16,167,17,18,19,21,233,236,238,244,245,252,254,256,41,95,97
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_10_113,PF01068,275-530 2,15,16,167,178,179,180,181,236,243,244,245,246,247,248,249,251,252,253,254,255
LAN_10_113,PF04675,9-184 46,61,62,63,64,65,66,69,70,90,93,94,96,97,98,99,100,101,103,104,105,110

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