Glaciozyma antarctica protein structure database

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Protein ID : LAN_09_181
Category : putative
Original description : Putative VAM6/VPS39 family protein
Sequence : MHSPFSLSTLIPPSVLGQDAVTAIALHANRVLVGTEKGALLVFDLSNASTSSAPPAATLVSRHDGFSKKAVDQLG
VIKELNALVCLSGGDLTLHLLPTFTLLSSFASQTRSAASLFVLSTLIHYFAPPPRRSNSASRSPHPPPSAPEIHT
TLAVACKRKLLLFSWIDGTWNTPMELALPHQIRGMAFGEGGKGARKVVAGFSTGDYGIISLPAQGEANRVPTLGE
LFSPPVPAAVVPAIAAAAAPPATASLGALGSYGERLGGLGGLAKATGSVMGLSALGSLSLGGKKVDKNGVVAVPR
AVAKGKKAVGKGRDPGAWLWGKEWGWEEDEKSGKEDEVLVVRENVALPLTISGRPRLTDSTGQAVLYPTPVDETL
VLPPYIVSLLPAPAPTPNGPPLSTPTYSSPTLCIHAIDSLSPVQTLDVPPRLASPPASVAESGISTSSSTATDAP
ITTARLLAVSSSAPQPPILLLTSKPPATRTGSEQTIWIVTMKSWESQILELGQKGAWEEAIRLMRRSGPGGGELP
SPLLRRLAILHALSLFNDRRFDVAIDAFIALDLSPAKVVSLYPERISGKLFLEPAAREEVFGGRPQHKVLAAMED
ANRVAEEAAEEARVKVVSAPSSPVKGSPMKGGKVYDDDTASIASGKTTASRLTGSKSWLRDRETKNEQAGETLEA
IAERAAADREKQELLQAKQDALNFSRSVDVLIRYLTDRRQKYAQALSALLPSARPSPSASRPPASAAELFALPDA
PLTELDPNQLARVAQVVDTALFKSYLATKPVMVGPLCRIENWCEVEEVEELLLTAKKYRELLDLYNGKDMHEKAV
KLLRQMSEDEDDFEEKGGPTVRYLQKLGADQLSLIFESSRWIFEANRAAGLEIFIADLEEVESLPRHATMAHLER
IGPDVCITYLEHIIHHLGEEGAEFHEKLIELYLAQVHSPNNTGSDEAYQKLLDLLESSTAYRADRMLGRLPSEDM
HEVRAILLGRLGRHEGALQIYVYQLDDHATAEEYCKRVHESDPAMRSTIFHILLRIYLRPRPDHPLLFTPALSLI
SAHASSIDAIEVFDLLPPLVALSDIKVFLEKTLRRSGEQAREAKIVKGIGRSWADAGEREVVELEERRVKITDSR
VCPQCHKRLGNSVIAIHSPHGEVTHYQCREDFSSNRNLLSS
KEGG Ontology ID : K20183
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00780 CNH domain 28-188 N/A
Pfam PF10366 Vacuolar sorting protein 39 domain 1 767-867 N/A
Pfam PF00637 Region in Clathrin and VPS 906-1014 GO:0006886, GO:0016192
Pfam PF10367 Vacuolar sorting protein 39 domain 2 1047-1155 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_09_181,PF00637,906-1014 FunMod -0.01628 Putative VAM6/VPS39 family protein LAN_09_181,PF00637,906-1014
LAN_09_181,PF00780,26-168 AlphaFold2 86.95 Putative VAM6/VPS39 family protein LAN_09_181,PF00780,26-168
LAN_09_181,PF10366,767-867 AlphaFold2 91.27 Putative VAM6/VPS39 family protein LAN_09_181,PF10366,767-867
LAN_09_181,PF10367,1047-1155 AlphaFold2 93.92 Putative VAM6/VPS39 family protein LAN_09_181,PF10367,1047-1155
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_09_181,PF00780,26-168 94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,122,124,140,141
LAN_09_181,PF10366,767-867 1,2,3,4,5,7,8,9,11,12,13,14,15,16,19,22,23,24,26,28,47,50,51,52
LAN_09_181,PF10367,1047-1155 57,75,77,78,83,84,85,86,87,89,90,91,92,93,94,95,96,101,104,105,106,107,108,109

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