Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_08_220
Category : putative
Original description : Putative helicase 
Sequence : MSYGKHLVQAAAASSSALFRTSTDLTLQAAEETHGDKVAPAEVDPSVEEVDTVEEEEVTAEEEEEDTAVDRVVRV
DKVGDRMSNLGDNLRSIKWDMAALAPITKDFYSEDKAVAARTEREITEFRREKEIQVFGRAVPKPVQNFAEVNFP
DYIMTEIKKAGFANPSPIQCQSWPMALAGRDLVAVSATGSGKTISFALPAMIHINAQPLLAPGDGPIALIIAPTR
ELAVQIQEECTKFGSSSRIRNTCVYGGVPKGGQIRDLQRGSEIVIATPGRLIDMLESGKTNLRRVTYLVMDEADR
MLDMGFEPQIRKIIEQIRPDRQTLMFSATWPKEVQKLAQEYLKDFIQVTIGSLELSANLSITQIVEVCSDFEKRG
KLVKHLEKISAESAKVLIFIGTKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMIATDVASR
GLDVKDIGYVINYDMPNQIEDYIHRIGRTGRAGKTGTAYSYFTPDQSKLARDMVKILTDAKQEEEDKDTVVEEDV
VDVVEEDTADAREEEEEDRGGDHSTSESPLYPSLLPFLSPFC
KEGG Ontology ID : K12823
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 294-302 N/A
ProSiteProfiles PS51195 DEAD-box RNA helicase Q motif profile. 142-170 GO:0003724
SMART SM00490 helicmild6 402-483 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_08_220,3.40.50.300-FF-000008,351-524 ColabFold 89.69 2.395 ATP-dependent RNA helicase RhlB LAN_08_220,3.40.50.300-FF-000008,351-524
LAN_08_220,3.40.50.300-FF-000079,104-351 ColabFold 95.54 1.852 probable ATP-dependent RNA helicase DDX17 LAN_08_220,3.40.50.300-FF-000079,104-351
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_08_220,3.40.50.300-FF-000008,351-524 3,96,97,100,101,117,120,121,123,124,127,128
LAN_08_220,3.40.50.300-FF-000079,104-351 121,122,123,147,148,149,151,152,169,171,175,194,196,197,199,200,201,202,203,206,225

Footer