Glaciozyma antarctica protein structure database

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Protein ID : LAN_08_127
Category : putative
Original description : Putative RRM (RNA recognition motif) domain-containing protein
Sequence : MDTTEEHATAESALLDEYSGILEQISEKPYQRELHLQHIDITKKLGLPQELDGAREMMSSYWPLSEAMWLEWIAD
RKAQLPQSPVEDLTPHMELMELYKRAVAEYLSTPLLVDYSQFAIGNYYASQGLSAPTQATDEDEPMEDAERKVGE
ADEILGALFGLESVRGVCKEVLEMGEVHLVESQSLWNVWRAFEMDSLKLNPGPEQVAQVDALYLARLCVPHLGLE
STFSGYSSFITKFDNVHYDTKLPAANKLYSNAKQTLDLREPEEAKLKQAGYADWAYLEYTNWELSVPRPDLKLVK
ALFERAVKDFPSSVAMWDAYLEFATSMPKKQSVLLEVAERAVKGLPQSGTLWAAYLRAAEKNQQGSDVVEGLFQR
AMSTGLLNGSMDDLVALYEARAGFHRREVDQVITNPEDMEPDMIDLVIAILEEGIEKISEISKRGDGDPQLRLEK
HLLRQLERFGRNNEASGLWEELTDNNPRSYAVWYGRADFETRLGNFRKAHEVYVAGCAARSLDYPEYLLEAWLSF
EKQNGTLSDLDFTLTKVKRQKKKIAVRRQREAMEAAATAEPVASTSATTESFIASAVQGEVDNGKKRERSPAPVE
AAPSKKVKFEPASDEVKRDRENSTVFVIGEAGAEFSEEDLKKLFSDCGAIRECKLKTIDNQAFAMVEFMDRETVL
AARTKDKKKINGVAVQVSIAWQLCLYITNFPEAFDKAAIEALFSKYGLIFDTRWPSKRFKNTRRFCYVQYTSAAD
AQAALALHGTELEPGLKLTVYVSDPGRKKGRTDAGANNKELYVAGLSKFVTELDLKRLFEPFGAVKGIRLNLDDK
GECKGYAFVEFEDEASANASLTLNNHELKKRRMSVTIAQPRATGTSRPPHEAVRERKVEVDARSLRVRGIAPGTE
EAIVQQAFEKHAVVKLVAMEVGATEATVELESAAEAGRLLLVKDTITMDGSPIEILQEGPAARLVAGKAYEEPKG
NAPLLPRNTGRSRGRIGLAGGRGGRGRSGIGAAGVAALQAVGAGAAASGTGEVAASTSGAAGGAGGKSQDDFRAL
LAKKA
KEGG Ontology ID : K22611
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 700-762 GO:0003723
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 791-858 GO:0003723
Gene3D 1.25.40.10 Tetratricopeptide repeat domain 23-248 GO:0005515
Gene3D 1.25.40.10 Tetratricopeptide repeat domain 279-567 GO:0005515
Gene3D 3.30.70.330 G3DSA:3.30.70.330 615-693 N/A
SMART SM00360 rrm1_1 889-956 GO:0003723
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_08_127,3.30.70.330-FF-000365,696-776 FunMod -0.43666 2.907 U4/U6 snRNA-associated-splicing factor PRP24 LAN_08_127,3.30.70.330-FF-000365,696-776
LAN_08_127,PF00076,791-858 FunMod -0.99472 2.261 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LAN_08_127,PF00076,791-858
LAN_08_127,PF00076,634-687 FunMod -0.19369 2.015 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LAN_08_127,PF00076,634-687
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_08_127,3.30.70.330-FF-000365,696-776 698,699,701,703,704,707,711,726,727,728,729,731,732,737,738,739,740,742,769,771,772,773,774
LAN_08_127,PF00076,791-858 791,792,794,795,808,817,828,829,830,831,833,842,846,848,849,851,852,853,854,855,856,857,858

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