Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_07_168
Category : putative
Original description : Putative protein YME1 homolog
Sequence : MAAPFGASLPRLALGKEAAWLRSCQHGSAVTQASRRAAPRPIASIPLHSYHSSASRSTPSPKRPRTSPSATPSLL
EHRSQPSAPASPQPHRSLSITSLATRFRLPVLRKHATDAPEDVEKQLKLFRELMESGEIKDKEELIGRWEELTEF
WAEGAEAAVRPLTKDDEAFKLYLRALASLASTSADPPAFFAKLSTAPSKRAALLDPTTASTPAPTEASANPASPT
TPIAPTPAQVLSPAALVTALFSGASGRGKGGEAKVVSQGSFGGLPSFGMGSAAAASASAVEPIRVIVEEAKSPLP
LRAARFLFVTLLYSFLLLSLLSLLLDSSGILRGANAQTTPFTATAAPDATDAAGRGTTFKDVHGVEEAKAELYEV
VEFLKDPTRFEKLGGRLPRGVLLTGPPGTGKTLLARAVAGEAGVAFFAASGSEFDEMYVGVGARRIRELFAAARK
AAPAIIFIDELDAIGGKRSPRDAHYTKQTLNQLLVELDGFNPGEGVILIGATNFPESLDKALVRPGRFDRHIVVP
LPDVRGRMSILQHHMRNVGYDKKQVDISMIARGTIGFSGADLQALVNQAAVKASAEDAPAVRASHFEWAKERIMM
GAARKSAFITEKDKLATAYHEGGHALVALYTPGAYPLQSVTVVPRGMALGYTLMLPEMDKNSHSLSEYRAKLDVA
MGGRVAEELIYGKDNVTDGASSDISNATSMASNMVRRFGFSDVIGPVAHTGDGDAPISPQTQAAIETEIRGLIEA
AQQRAKDLLLLKAVELERLARALVEHETLDLNEVKRVVKGEKIVKNVLDVL
KEGG Ontology ID : K08955
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF17862 AAA+ lid domain 550-592 N/A
Pfam PF01434 Peptidase family M41 608-787 GO:0004176, GO:0004222, GO:0005524, GO:0006508
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 400-419 N/A
ProSitePatterns PS00674 AAA-protein family signature. 496-514 GO:0005524, GO:0016887
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_07_168,1.10.8.60-FF-000001,527-602 FunMod -1.26384 2.629 ATP-dependent zinc metalloprotease FtsH LAN_07_168,1.10.8.60-FF-000001,527-602
LAN_07_168,1.20.58.760-FF-000001,603-794 ColabFold 93.73 1.837 ATP-dependent zinc metalloprotease FtsH LAN_07_168,1.20.58.760-FF-000001,603-794
LAN_07_168,3.40.50.300-FF-000175,347-526 ColabFold 88.23 2.236 ATP-dependent zinc metalloprotease FTSH 4 LAN_07_168,3.40.50.300-FF-000175,347-526
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_07_168,1.20.58.760-FF-000001,603-794 527,528,529,530,531,533,535,551,552,553,554,557,558,560,561,562,563,565,566,588,593,595,597
LAN_07_168,3.40.50.300-FF-000175,347-526 1,2,3,4,5,6,7,8,9,10,11,12,13,15,41,42,43,44,45,46,47,49,175
LAN_07_168,1.10.8.60-FF-000001,527-602 57,81,82,84,85,86,87,88,89,90,93,94,117,126,127,128,129,130,131,132

Footer