Glaciozyma antarctica protein structure database

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Protein ID : LAN_07_090
Category : putative
Original description : Putative ATP-dependent RNA helicase
Sequence : MAFWRPGTVAPGSSIDRDAEASSIGGAGSVGAVTGRVQGNVAVSDRRSRLPIAKQRDPLLYLLEQHPVVILQSPT
GTGKSTQLPQFFLEAGWASDGRTIGITQPRRVAAISVAQRVAEEVGCILGEEVGYHIRFESLSTPETKILYLTDG
MLFREILVDPLLSRYSVIMVDEAHERSIYTDLLLGVLKKIRRVRPELRIIISSATIDAQSFVDFFNTQPPTSAVA
SSGITAADELLPPPAKKSRWDKQEKVPKSEAIMVRLEGRVYPVEIAYLEEPTADVVLKVVETVFDIHLQQPPGDI
LVFLTGREEIDRCLQQISDNILPHGAPELLSLALHSGLSTELQMAVFDPPPPRTRKVIISTNVAEASVTIEGIKY
VVDSGLVKLRSFNPLTGMDALVTTPCSHASLAQRAGRAGRTSPGKCFRLFPPSVLPKLLPTTPPELARSDLSLLV
LQLKSLGIQNVLRFDWMTAPSAAMLERALEFLYCLGALDDEGKLTKPLGVRMAEMPVDPMMAKILLDSANYQCSD
EILTIAAMTSVQNVFLLDGGDSVRAELERRKFTAEEGDHLTALNAYNAFIKYGRKSSKWCQTHRLNFKALSRALS
IRTQLRKYLQRFDIPIISCGEDHSKVRRCLTSGYFRNAAKVMPDGTYRSSAVQVLHAHPSSVLFTRIPTTSFVIY
HEVIETTKRFMRDITSIEQDWLPELAPHYYAFGEK
KEGG Ontology ID : K13117
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00271 Helicase conserved C-terminal domain 291-416 N/A
Pfam PF04408 Helicase associated domain (HA2) 478-566 GO:0004386
Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 626-704 N/A
ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 166-175 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_07_090,3.40.50.300-FF-000578,20-231 AlphaFold2 85.25 Putative ATP-dependent RNA helicase LAN_07_090,3.40.50.300-FF-000578,20-231
LAN_07_090,PF00271,291-416 FunMod -0.70351 Putative ATP-dependent RNA helicase LAN_07_090,PF00271,291-416
LAN_07_090,PF04408,478-566 FunMod -0.40736 Putative ATP-dependent RNA helicase LAN_07_090,PF04408,478-566
LAN_07_090,PF07717,626-704 FunMod -0.16086 Putative ATP-dependent RNA helicase LAN_07_090,PF07717,626-704
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_07_090,3.40.50.300-FF-000578,20-231 85,86,87,114,115,129,131,134,135,137,138,153,155,156,157,158,159,160,162,163,167
LAN_07_090,PF04408,478-566 478,479,480,481,482,483,484,485,486,488,489,490,492,494,507,508,509,510,511,513,514,517,526,527,531,534

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