Glaciozyma antarctica protein structure database

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Protein ID : LAN_07_006
Category : putative
Original description : Putative DNA repair protein
Sequence : MSSNLPQSSFGDLLKSDDFEQSILELDQAEQDSISHPTSRHKRPSSPTPTDQPRPEDVDDCYGVTGFGEGHKFFQ
HKRKKLEHQHQAKRWDENNVADRPQFFQGLSIYINGLTEELGLRELQDLIVLHGGTYVPYLDRLSLVTHIVASNL
TPKKRAELAAYKVATPLWLVDSARKGRLLDWRKHSLLAPKESERALIGGGEEADRMGTQTAQRSLLGFLGKGKRK
ETGREEERLTTSAKGKTVDQTRESLSERGVRLAHSALADQSLPTLSCSTRPLFPPVAGPSTSTPTTSTKRLSRPP
PISPLSTDTSGSPTDAYLASMPTEKSERTTALLQDPEWLAKHSSTSADFISKYFVQSRLHHLSTWKAELKQLVAG
VQLLLRPARKKNLTGLAADAEQRTVFHIDFDCFFVSAGLVSRPELRGKPVAVCHAGAGGEGKASTSEIASCSYEA
RAMGVKNGMSLGRARELCSDIQTMPYEFEVYKSLSAKFYTIARKSPRLSVPPSSLTSVAVRNADFLQAVSIDEVL
IEVATPSLPTSTTYSSDPALELAHLIRAEIRSATSCEVSIGISHNILLARLATHRAKPANAFHLVPSDVEEFLAP
LPVETLPGIGWELASKLVDKLKVEKVGDLLSHSKTSLREVLGPTNGDKYWGFARGIDARELEGTKPRESVSVEVN
YGIRFTTKDEVKTFLLQLGEEVTRRLKSESCRSRHLTLKIKKRHPEADVDPPKFLGHGHCTNHNANTTLSAPTDD
PSTIGNAAWKLMESFMFPPEELRGIAIQMGKLKKEGVVVPRERGQGTLAFGVMAKPTARGVDAAPAPLDIEEEEE
EEQEEEEEDLVAPPPQQQSRASTSTTLQPHVSIPPKVQVPAMFKPKKKSKAPALPSVSDVTDADLAHFGIDPELF
RAVPPDVQFEEWTKACRSRLATTWKPTKVQARKAAEKSQPKLGAQVTKPGVFSSSQAKPLSPIPAVTLPLIVPSS
PPPITDEEIAAFGIDVNFFRELPLEIQRETYAEYLARKKAFTVAAVAPSKTKARTVQQFDFRAPRPIRFGGKVET
DDIRTKIEAWIEASVEEGPVNEDVDKLATFLEKCADRKVGRDLAKAADLLAWWEYLLDASVGNEEESEGVGRAWW
EALRGVRARVDRVVRREFGASLAVGRGACLGTP
KEGG Ontology ID : K03515
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF16727 DNA repair protein REV1 C-terminal domain 1052-1147 N/A
Gene3D 1.10.150.20 5' to 3' exonuclease, C-terminal subdomain 592-667 N/A
Gene3D 3.40.1170.60 G3DSA:3.40.1170.60 417-475 N/A
Gene3D 6.10.250.1490 G3DSA:6.10.250.1490 348-376 N/A
SMART SM00292 BRCT_7 99-176 N/A
SUPERFAMILY SSF100879 Lesion bypass DNA polymerase (Y-family), little finger domain 668-780 GO:0003684, GO:0006281
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_07_006,3.30.1490.100-FF-000001,667-788 FunMod -1.61367 2.159 DNA repair protein REV1 LAN_07_006,3.30.1490.100-FF-000001,667-788
LAN_07_006,PF00817,403-578 FunMod -0.98412 1.903 impB/mucB/samB family LAN_07_006,PF00817,403-578
LAN_07_006,PF11798,591-618 ColabFold 82.91 2.448 IMS family HHH motif LAN_07_006,PF11798,591-618
LAN_07_006,PF16589,99-183 FunMod -1.1374 2.983 BRCT domain, a BRCA1 C-terminus domain LAN_07_006,PF16589,99-183
LAN_07_006,PF16727,1052-1147 FunMod -1.80935 2.267 DNA repair protein REV1 C-terminal domain LAN_07_006,PF16727,1052-1147
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_07_006,3.30.1490.100-FF-000001,667-788 674,675,676,677,679,723,725,727,728,729,730,732,733,734
LAN_07_006,PF11798,591-618 1,2,3,4,6,7,8,9,10,11,12,13,14,15,16,17,18,19,21,22,23,25,26,27,28
LAN_07_006,PF16727,1052-1147 1058,1101,1102,1104,1105,1106,1108,1109,1110,1111,1112,1125,1126

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