Glaciozyma antarctica protein structure database

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Protein ID : LAN_06_385
Category : putative
Original description : Putative helicase
Sequence : MSSDPLFASFANPSASTPTLPTPKKRQISPPTPAATESAKKARLAEEEAAALSAEPAKKFVDTDEFETEAKTSVP
GSVGLGGGEPEGLILSHQVRHQVALPPHYPYIPIASHVPLAEPARTYPFELDPFQKVSIASIERNESVLVSAHTS
AGKTVVAEYAIAQCLKGGMRVVYTSPIKALSNQKYREMLAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRG
SEIMREVAWVIFDEIHYMRDKERGVVHYVFLSATIPNAMEFAEWICTTHSQPCHVVYTDFRPTPLQHYLFPAGGD
GIHLVVDEKGAFREDNFQKAMGALTEGKGEDPASSTGGKGRKGQTKKGGTKGPSDIYKIVKMIMVKNYNPVIVFA
FSKRECEGLALQMSKLEFNTDEERDMVTNVFTNAISNLSDDDRTLPQIEHILPLLKRGIGIHHGGLLPILKEVIE
ILFQEGLIKVLFATETFSIGLNMPAKTVVFTTVRKFDGRDFRNLSSGEYIQMSGRAGRRGLDDRGIVIMMTDEKL
EPAAAKNMVKGEADRLDSAFHLGYNMILNLMRVEGLTPEYMLERCFYQFQNTASVPQLEDELRELDLVKAGLVIP
DEENIADYYELRQQLDILNKDLRDVLNHPTYALPFLQPGRLVRVKHDDLDFGWGCVVNYQKRLGIKGKPLPATEA
PQSQYIVDVLLHCASGTAPSIQKKGPPAAATGIRPCPPGEEGEFAVVPVLLATLDGISHIRIFLAKDLKPPEARQ
QALKSVQEVRRRFPDGIALLDPVENMGIVDDAFKKLLRKIEILESRLLANALHNDPKLPALYDQYASKQEVQTKI
RTVKKKIQAAHSVMHLDELKCRKRALRRLGFATTEDVVEQKGRVACEISSGDELLLTEMIFNGVFNDLTPEQCAA
LLSCFVFDEKSEQTSKLKDELAGPLRVMQEAARRIAKISIESKLPLVEEEYVASFKPELMDAVYSWCNGAKFSEI
CKMTDVFEGSLIRVFRRLQELIRQMSMAARAIGSEELEQKFNDSLKCLERQSSVAFAASLYL
KEGG Ontology ID : K12598
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 2.40.30.300-FF-000001 Mtr4 exosome RNA helicase 637-766 N/A
Pfam PF00270 DEAD/DEAH box helicase 128-249 GO:0003676, GO:0005524
Pfam PF08148 DSHCT (NUC185) domain 861-1025 N/A
SMART SM00490 helicmild6 421-510 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_06_385,3.40.50.300-FF-000083,93-286 ColabFold 91.94 2.024 ATP-dependent RNA helicase DOB1 LAN_06_385,3.40.50.300-FF-000083,93-286
LAN_06_385,3.40.50.300-FF-000141,287-542 ColabFold 88.46 2.358 ATP-dependent RNA helicase DOB1 LAN_06_385,3.40.50.300-FF-000141,287-542
LAN_06_385,PF13234,564-833 FunMod -0.4911 2.743 rRNA-processing arch domain LAN_06_385,PF13234,564-833
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_06_385,3.40.50.300-FF-000083,93-286 84,85,123,146,147,149,150,151,152,153,166,167,168,169,170,174,177
LAN_06_385,3.40.50.300-FF-000141,287-542 1,2,3,4,84,183,184,185,186,188,190,215,218,219,222,223,224,228
LAN_06_385,PF13234,564-833 638,640,643,653,656,657,731,732,734,735,736,737,738,762,763,766,768,769

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