Glaciozyma antarctica protein structure database

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Protein ID : LAN_06_069
Category : putative
Original description : Putative polynucleotidyl transferase, Ribonuclease H fold protein
Sequence : MPPYKSNNRGRGGGGGGGGRGGRGSWRGRGRGGGGGARGGKAGAPVLKTEAEGTREGDRLEDAKAWDDLDEKLGF
PKYQEGPARTGWLVNMIQTLQLDESTSSGRMGVDYYFIQEDGGMFKSTICYEPYFYIVCRKGHEGQVEEWIMRKY
EDLVIKIERVRKEDLKLPNHLLGYRREYIQLFFRNQNDLFSVRRELLPIATKNREKLDAVDTYAEVISGEQQFNM
DYEMSEGERKGQSFAQVGAGAGAAGSPSDSILDIREYDVPYYLRVAIDKDIRVGLWYEVAALHGDITITLIKERV
SRAEPVVMAFDIETTKAPLKFPDQQTDQVMMISYMIDGQGFLITNREIVSADIEDFEYTPKPEYEGPFTIFNEAD
EPATLRRFFEHVREAKPTVIATYNGDSFDFPFLLARATVHGIDMYKETGFTKDQEEEFKSRGCVHMDCFRWVKRD
SYLPQGSQGLKAVTVAKLGYNPIELDPELMTPYAVEQPQILAQYSVSDAVATYYLYMKYVHPFVFSLCNIIPLNP
DEVLRKGTGTLCETLLMVEAYRGEVIMPNRHVETQTNMYDGHLLESETYVGGHVEALEAGVFRSDIAADFKMNPD
AVQQLIDDLDDALQFSITEEGKHSLDDVVNYDEVKANITAMLEELRDNPLRSDTPLIYHLDVAAMYPNIMLSNRL
QPDSVVDEATCAACDFNRPGKQCQRKMKWAWRGEYFPAKLDEFKMVRNALEQEFFPPKWPGKPQRRFVDLSPTEQ
TSLLHKRLGDYSRKVYKKTKETKIETKEAIICQRENPFYIDTVRTFRDRRYTYKGLHKTWKKNLDTAQLEGSVPE
IVDAKNMIVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGITCLTGASIIQMARKLVEQIGRPLELDTDGIW
CMLPSAFPDGFDFKLANGKKYGISYPCTMLNHLVYKDFTNDQYHELVDPARGTYEVRKENSIFFELDGPYRAMIL
PSSKEEDKLLKKRYAVFDTDGSLAELKGFEVKRRGELQLIKTFQSQIFEKFLLGSDLKECYASVASVADKWLDVL
FTKAASLPDDELVELIAENRSMSKTLAEYGAQKSTSISTAKRLAEFLGEQMVRDKGLSCRFIISTKPHGAPVTER
AVPVAIFSAEPSIKKHFLRKWLKDNSLADFELRSILDWDYYIERLGSVIQKLITIPAALQKVSNPVPRIRHPDWL
FRRVANLEDKFKQHKVDEMFARQKPVVREEGDVDDLEDFGRRAEKARIVERSPTPPPAPAPDMMVNYSGWIAHMK
PIWREKRKQIAAAGRAGFGSKSGALGSMLAQQSNLLSSQVWDIVQITPSVRLKIRREFLVNFVELPTADDAWPKT
CMVEALTRTLPRSQRCINLVRVSTPEEDYIKDEPIYGELLNGPDVDGVYEMQVPLIVRALLRLGSSCVPDASRGI
TLHTGLDRHFELDDLKRSGATLSRRRYLDRGQKLRYTYLFHTTSDSRHIFGLFLPDGTAKVYVVERGKSREVPNL
ERYYAEQLQKRKDVEQQKAASEREAGVFAYADTIKVEVTFPSSEDVALRALSRELAALASQKSASSLLIVHSPKP
RAYFDERVAGSSQFPFIVIQSSKADNTFPALLWQAPACRRMVQHYLRASVWIKERIELADRFDVPICNLESDVPV
FLADIDFARRLVKADLVLWWSPSSRPDLGGREADANSQQLAEELVNPEIGRAGCYSNACLEVDLRNLAIDAVLQS
SLVYELEGGEGGASIGFEAASHNLDEYAKGTAHAAVSLGDAILPTQTFNILRSMVKAWSTEASKPDGAHWRLMID
HFWRWISSPAAKLYDPALYRFVHGLMRKTFSQLLAEFRRLGSEIVHADFGRIFLLTSKPSSSSAYAYANYVVSSV
TSRELFRYIQLDIVRFWDQLVWMDTANFAGVICHHPEEIDLPDAEVEIEMQWNVATFLPPAVQEDFAVVVGRFVH
GMHMAKRQSSDSIRTPLRILQNGSGTAADPNKADELELARTFVSQTLTRQLLKVVTSLRDRYADKSQREDFIFPL
LPGSHLKMKNPILEFIKTTCAILSLAKDVSAEGIVLKRNLLDLIGVREFASEAAFRNPCLPFKVPMVVCKNCNTA
RDLDLCRNVDLLVQGRAWSCERCATEYDRNAIEAVMIDAIQRRAVSYQLQDLRCGRCKQIKSDNLRVHCECSGEY
VMAETRADLLRRLQVTGNVADAHGLETLGACIEELREAIGSA
KEGG Ontology ID : K02324
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd05779 DNA_polB_epsilon_exo 304-507 N/A
FunFam 3.90.1600.10-FF-000006 DNA polymerase epsilon catalytic subunit 822-999 N/A
Pfam PF08490 Domain of unknown function (DUF1744) 1501-1906 GO:0003887, GO:0005634, GO:0006260, GO:0008270
Gene3D 1.10.132.60 DNA polymerase family B, C-terminal domain 1003-1188 N/A
Gene3D 3.30.342.10 DNA Polymerase, chain B, domain 1 91-289 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_06_069,PF00136,801-1178 ColabFold 91.88 1.684 DNA polymerase family B LAN_06_069,PF00136,801-1178
LAN_06_069,PF03104,113-463 ColabFold 86.5 2.429 DNA polymerase family B, exonuclease domain LAN_06_069,PF03104,113-463
LAN_06_069,PF08490,1501-1906 ColabFold 88.5 2.043 Domain of unknown function (DUF1744) LAN_06_069,PF08490,1501-1906
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_06_069,PF00136,801-1178 42,43,44,45,46,47,48,49,50,51,52,53,55,56,57,58,59,60,61,62,63,64,65,66,68,69,70,71,73,74
LAN_06_069,PF03104,113-463 57,58,59,60,61,62,111,112,113,114,115,116,117,118,119,120,121,122,123,124,125,126,127,128,129,159,286,329,331,332,334,337,338,339,340,341,342,343,345,346,348,349,350,351
LAN_06_069,PF08490,1501-1906 1,36,37,38,40,105,106,107,108,109,110,111,112,113,116,117,120