Glaciozyma antarctica protein structure database

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Protein ID : LAN_05_412
Category : putative
Original description : Putative RRM (RNA recognition motif) domain-containing protein
Sequence : MQSDQPDRYVEPDDVRALEKPERSGSVRSQDSRHTDRKDGDEKRKQRSDRDDGDRRRRRDSPDREKERERERGGD
DRRERRRDGSREPRRRDDDRDEHRETKRRRSRSRSRERREPPRDSRDYDRRPYRDSRPQEPEYRPRHRGSPSYDN
YARGNPRRRSPSPQIPQLSEEQREMRSVFVSQLSARVTDRELGLFFEQQAGKVREAKVIVDRISRRSKGVGYVEF
VDLETVSKALGLTNTKLLGIPIIVQYTEAEKNRQARDNALGVPGQAAGLYVGSLNFALTESDIRQVFQPFGAVEL
VDLHKDPLTGKSKGYAFVQFTDPQDAVKALEKMNNFPLAGREIKVGLVADKSQTMGGRQDLQLDDGTGGGNLNNI
TRMELMQKLSRSDRPAIDLPMAPMFRPNIPQATTKNVMLKDAFDPEEETERDWDIELRDDVKSEVESKYGKVSEI
FVVKESQGEIYIRFDTVEAATQAVEGLNGRWFGGRQISAAHTTDSLFDAKK
KEGG Ontology ID : K13091
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 178-242 GO:0003723
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 274-344 GO:0003723
Pfam PF15519 linker between RRM2 and RRM3 domains in RBM39 protein 364-428 N/A
Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 442-487 GO:0003723
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_05_412,PF00076,442-487 AlphaFold2 91.92 Putative RRM (RNA recognition motif) domain-containing protein LAN_05_412,PF00076,442-487
LAN_05_412,PF00076,274-344 FunMod -1.00619 Putative RRM (RNA recognition motif) domain-containing protein LAN_05_412,PF00076,274-344
LAN_05_412,PF00076,178-242 FunMod -0.72594 Putative RRM (RNA recognition motif) domain-containing protein LAN_05_412,PF00076,178-242
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_05_412,PF00076,442-487 1,2,3,4,5,6,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,34,35,36,37,38,39,40,41,42,43,44,45,46
LAN_05_412,PF00076,274-344 274,275,278,280,281,283,302,303,304,313,314,315,317,330,333,335,336,337,339,340,341,342,344
LAN_05_412,PF00076,178-242 178,179,180,181,182,183,185,188,189,204,206,207,208,209,210,211,212,213,214,215,216,217,218,219,220,222,224,228,231,234,235

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