Glaciozyma antarctica protein structure database

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Protein ID : LAN_05_350
Category : putative
Original description : Putative DNA polymerase type-B family protein
Sequence : MSSRADKDKKRAKLEELKAARAGGKRDYKPKEDSDIYDEVDESDYKVIVKGRLAEDDFIEEDGVSGYADNGMEDW
DRSEASSDEEDKEARKKAKKLKVSTLKAAAKPSDSSKSLTSAAARRKAQRPVIEEGANPYINPNRKKEIKMGAPL
PQQEDDFMANLLGGLEGQATISKQETFKPASARQSIGSSNALGKRKVGEQGAVRSMEASSSDAAISSDPFFAGKE
SGASSDGEFSGSAKKARIEEVEQDLGGMGDMDFYDGDDGAAWAEDGDVKMSDAKLEDDDEIFIKPDLPTKAKGPP
IRRQLVNGTAVKVLPKPEPVDFQMPSLLPLPVGVAPAKSKGMDWRTATAALASIVTPAGADFDDDEKEEDEPLPQ
PESLKRGGKKAPPPPTIAHANVNALEEDGSLRFWWFDYLEPTPGAVRLIGKVRVKGGPDDGKWVSACVSVTGLKR
KLYVLPRAKALDSDGVEIDDDDEPPEFDDVEMDFVTDATERFGATNVVCTPEWVKRRYVFGIKGIPREETDWLEV
TCDFPGGNAKGERTDIPADASGERYSHVFGTNTSGFEMFVIDRKIMGPCWLNIPAPQISTKAISWTKLEVEVPHD
GISTFAMDDKLAPKDNPPLTIMSISTRTVLHLSQNKREIVCTSVRTWQDSNLDDPLPIEKQPSSVTTLVRSLHGP
FPNGFEAAARAERPRGRGSTLLPLRDEKALLTQLVAIIARNDPDVIVGHDFLSKGAELDIILERVKEFNIDNWSR
IGRFRRPKIPPLRSGANAGLIPGRLICDLSSDGSKSIIDSVTWSLTEMCETHLKIEREDLDPDDTALLFDQTLST
PAKLLHFVRHCEADAFFQVAIAFKVQALPLTRQLTNLAGNSWNKTLAGNRAERNEYILLHRFNENGFVCPDKFNY
FERKAAEAKALKTKAKGKAKEDKDETDLIVAKKEKYQGGLVFEPKRGLWDRFVLVMDFNSLYPSIIQEYDIDFST
IDWTADGMENPETAPDRAPIEGAPQGVLPQLISSLVDRRRAVKRMMKDKSVSPATMAQYDIRQKALKLTANSMYG
CLGYDGSRFYARALASLTTLKGRDILMRTKADAESLGLEVIYGDTDSVMINTDVLDYQAALKIGEDFKKLINDKY
RKLEIDTDAVFKTMLLLNKKKYAALKIEEDGSTTTEVKGLDLKRREFCELSKATSKRSCRARPPRSSIVVIHDYL
TSLGENVRAGLIPIEQYIIFKRLGKDPEKYPDAKSLPHVQVALKMKSKGQAAKEGDVIPYIFCVGDNGPAKTGKA
ENAHHPDDVRRQGSTLKIDFDVYLSGQILASIERLCSHIEGTEKARLAECLGLDVTNYKGSTGEVAEREFKTLQS
QITDKERFAESEPLSIRCRYCHSEAIFDGAVENAAGLITPSGIFCANAECSQPLSFASMSVQLDLACRSFIAKFY
EQWLVCDDSSCGNRTRMMSVYGKRCLAAPCRGQMHFEYNDSKLYDQLLFFDTLFDPEKGRMNAAGSAKQADVLTL
LEANKGSLTALRAVVQKHLDKNGRRWVGMASLFSYMGSK
KEGG Ontology ID : K02320
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 1.10.132.60-FF-000004 DNA polymerase 1165-1343 N/A
Pfam PF12254 DNA polymerase alpha subunit p180 N terminal 14-76 N/A
Gene3D 3.30.70.2820 G3DSA:3.30.70.2820 449-571 N/A
Gene3D 3.30.420.10 Ribonuclease H-like superfamily/Ribonuclease H 617-851 GO:0003676
Gene3D 1.10.3200.20 DNA Polymerase alpha, zinc finger 1345-1522 N/A
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 953-966 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 1038-1050 GO:0000166, GO:0003676, GO:0003887
PRINTS PR00106 DNA-directed DNA-polymerase family B signature 1090-1098 GO:0000166, GO:0003676, GO:0003887
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_05_350,PF00136,866-1314 AlphaFold2 86.1 Putative DNA polymerase type-B family protein LAN_05_350,PF00136,866-1314
LAN_05_350,PF03104,439-786 FunMod -0.73463 Putative DNA polymerase type-B family protein LAN_05_350,PF03104,439-786
LAN_05_350,PF08996,1350-1533 FunMod -0.63308 Putative DNA polymerase type-B family protein LAN_05_350,PF08996,1350-1533
LAN_05_350,PF12254,14-76 AlphaFold2 79.93 Putative DNA polymerase type-B family protein LAN_05_350,PF12254,14-76
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_05_350,PF00136,866-1314 1,2,3,4,5,6,7,8,9,10,11,12,13,16,17,19,32,175,178,179,181,182,184,185,189,191,195
LAN_05_350,PF12254,14-76 619,620,621,640,647,669,672,673,674,675,676,677,701,717,719,727,751,753,754,756,768,769,770,771,772,773,775,777
LAN_05_350,PF03104,439-786 24,32,36,39,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63

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