Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_04_110
Category : putative
Original description : Putative tyrosyl-DNA phosphodiesterase 
Sequence : MNSGMRKTPPEVIILSSDDEEPLAGLSTAPPPRGPRLQKQEPEDDDEDDAQMRGSGSRGKEVGAGRGSCGGGPVD
AAQEGRKVKREVSPALPTLLPAAKRIKSEDGAKSSSTSPDSSLSTAKTERRYWEGALLRCSSIYVPDSTSLNFSD
LLAAPHKLLRAIVSSYDWAYRDEWLLSLFPKGTPLLLAKEKRDRVTFRTFADVRRTPRGGGRCMHAKAIVLYFPT
FCRFIIPSANATPVDWSRLDNAFWIQDFRSHAPSPSLSKPRLNPTHSSSSLPFLNYLAHLRCSKEFLTPFLDYDF
STATPGVQLVETRQGVWDGFDAMEVGGGMCSLAKAVAAAGFSKGGRWEIELSGSSIDTYTPLWLAQFYASCCGIH
PRTYFSSKNPTAPNLPSPLPLKVVFPTLDEVIASHGSYVIIALRKPSSQAAGEFRYEGYVYIGSHNPTRAAWGRL
DTGPKGVPTLWNSNYELGVLIPARGGSEEEVERRVGELAGFPRPLIPYARGDVPWMQERFQKEIYGKS
KEGG Ontology ID : K10862
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
PANTHER PTHR12415 TYROSYL-DNA PHOSPHODIESTERASE 1 426-517 N/A
Gene3D 3.30.870.10 Endonuclease Chain A 307-416 N/A
SUPERFAMILY SSF56024 Phospholipase D/nuclease 143-302 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_04_110,PF06087,433-497 AlphaFold2 90.49 Putative tyrosyl-DNA phosphodiesterase LAN_04_110,PF06087,433-497
LAN_04_110,PF06087,212-414 AlphaFold2 85.79 Putative tyrosyl-DNA phosphodiesterase LAN_04_110,PF06087,212-414
Ligand binding site information :
Structure ID Residues
LAN_04_110,PF06087,212-414 1,101,102,104,106,112,115,116,117,118,121,140,141,142,143,147,148,152,155,156,2,3,99
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_04_110,PF06087,212-414 1,2,3,4,5,6,8,22,23,24,25,26,27,28,30,31,32,33,34,35,141,142,143,144,145,146,147,148,187,189,190,191,192,193,194,195,196,197,198,199,200,201,202,203

Footer