Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_04_039
Category : putative
Original description : Putative AAA ATPase 
Sequence : MSWFNQAQSGPPAPPRSQPQPSYSSLPTQPRPQPSQAPRPPAPRYTDASPPPSEKRYAPSSALVARRAAPRSATA
AGRPGRYAVVEAPSPSHALTNCLIVSEADWAGVPYVLVKGQYVFTTKTDPKVAPGTIGAARLVRQWAQLSQSGDI
VDVEAFNPASTGSDVYLASLDLEIAYWFEKNATGEQYDADQLMQVFVRAYNGLIFTPGQLLVFDFHGQNLKATVK
GLHNLSLGGSSGGRIGILTPESEVNFVKDPASAIKIKSSAKKAPPNAILAPNFKFEDMGIGGLDTEFSAIFRRAF
ASRIFPPGLVEKLGIQHVKGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPEILNKFVGQSEENIRKLFGDAE
KEYKEKGDESGLHIIIFDELDAICKQRGSTNNGTGVGDSVVNQLLSKMDGVDQLNNILIIGMTNRLDMIDEGPVR
PGRLEVHIEISLPDEAGRIQILQIHTSKMRTNGVMAQDVDLVELATMTKNFSGAEIGGLVKSATSFAFNRHVKVG
TMAGISDDIDQIQVGRDDFMQALDEVQPAFGVNEEELQAVVQNGIIHFADHIHSILEDGKLFVEQVRVSQRTPLV
SLLIHGQSGTGKTALAATIAMASDFPFIKLISAENMVGYSEAQKIAYLNKVFTDSYKSPLSVIVVDGIERILDWV
PIGPRFSNGVLQALMVLLGKRPPKGRRLLVISTTSNRSMLTDMDVMDSFASSIRVPSLSSLSQIDYVLRDVALFR
TAPEAQRAMQLLQQAGFGEEGKGGSGAWGEVGGVVVGVGGVEALVNRGSRNFVVESFEFVVQSFGLGRWRLPELH
PPRSLAPLELSLDTDW
KEGG Ontology ID : K06027
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
FunFam 2.40.40.20-FF-000012 Vesicle-fusing ATPase protein 80-156 N/A
FunFam 1.10.8.60-FF-000026 vesicle-fusing ATPase isoform X1 463-551 N/A
Pfam PF02933 Cell division protein 48 (CDC48), domain 2 186-226 N/A
Pfam PF00004 ATPase family associated with various cellular activities (AAA) 321-461 GO:0005524, GO:0016887
ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 602-615 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_04_039,1.10.8.60-FF-000026,463-551 FunMod -0.47536 2.601 vesicle-fusing ATPase isoform X1 LAN_04_039,1.10.8.60-FF-000026,463-551
LAN_04_039,2.40.40.20-FF-000012,80-156 FunMod -1.22514 2.79 Vesicle-fusing ATPase protein LAN_04_039,2.40.40.20-FF-000012,80-156
LAN_04_039,3.40.50.300-FF-000166,560-731 ColabFold 92.13 2.16 vesicle-fusing ATPase isoform X1 LAN_04_039,3.40.50.300-FF-000166,560-731
LAN_04_039,3.40.50.300-FF-000187,273-463 ColabFold 76.24 2.865 Vesicular-fusion ATPase SEC18 LAN_04_039,3.40.50.300-FF-000187,273-463
LAN_04_039,PF02933,186-226 FunMod -0.06808 2.672 Cell division protein 48 (CDC48), domain 2 LAN_04_039,PF02933,186-226
LAN_04_039,PF17862,488-527 ColabFold 90.59 2.004 AAA+ lid domain LAN_04_039,PF17862,488-527
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_04_039,3.40.50.300-FF-000166,560-731 473,474,476,477,478,479,481,482,483,484,490,513,517,520,521,522,526,528,529,539
LAN_04_039,3.40.50.300-FF-000187,273-463 82,97,105,108,109,110,112,114,115,116,118,119,120,141,143,144,150,152
LAN_04_039,1.10.8.60-FF-000026,463-551 9,10,11,12,13,14,15,16,17,19,20,22,23,51,52,54,55,59,170,172
LAN_04_039,2.40.40.20-FF-000012,80-156 1,25,26,28,29,31,32,33,34,35,37,46,54,55,56,58,60,61,158,190,191
LAN_04_039,PF17862,488-527 1,2,3,4,5,6,7,8,9,10,11,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40

Footer