Glaciozyma antarctica protein structure database

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Protein ID : LAN_03_239
Category : putative
Original description : Putative RRM (RNA recognition motif) domain-containing protein
Sequence : MSTPPLSKRARELQQSENGAPFRSPSLSPSLAPSQIFTPDPPLPTVQEGDSLLSSPPGLSRRPRAGTLPSTFHLD
SSSSNSAIRHLSNGVLPPPSMNGTSSLPVSGSSTPSEFNFNSSLLSSSRLRSGSLTLPSSGLSNAFGPPGNVWSG
GWGTPATRSPGQSGLSTETKAGGDDLRSPDSSTYGDDSHVRTLDYLGLEGDSPVGGFGPFSEESGRGGSRSAVGA
PGMHSSSSFGNLRSINDIFQAQNGRMRSNTVATFPRTSEPYLRSALPSPFPPSRVSEANEEYFGDGKSSSYHRSS
DSTDSTRLLYSTGNPDDERDTLGEVQRLRSNNSPSRARAATIGILDESREIFMRRRAGTATGMTPHAVSMGSGDV
GSALGLDAGSEYPGGAASVMARGMRGLSISQDEMPGWRLSGPLTPEAVSLTPPLQQPTRSLWIGNLDPKTSPGEL
QAVFAPYGAIESLRIIPEKECGFVNFVSTSDAIRAKEDVLNRLGGQLTKTSGMVRIGFGKMDTAPLTPSTGLHHS
RIVSGGSPLINAPDLNIQTSPTRALWVGSIPASTTPNHLLAIFSPFGLIESARVLTHKSCGFINFERLDDAISAR
KALNGREILGTEVGSVRIGFAKVPTKNPNSPFGSDSPPLNGIGSLPATYNALNQIAGASGVPLDRQLGADGGMQD
YRSNLVVGLVTNGQYASAHALQATTGGANGQTFGGAELMPETVHAAVSEMQLMMRELGGDAREVEAHAQAVAAPR
LPVNYYSTIPQHALADPALSRRYANADAPRLREIRKRLDSPISVEEVDSIALDLVDEAVALSSDYIGNTLIQKIF
ERASLIGRMALLERIAPHLAVIGTHKNGTWAVQKIIQCVQEQDEFDLIQRNLQPYTPSLLLNDFGNYVVQGAMRF
RSPVSDFIFDAMVDRCWEIGSGRFGARSTRQTLESPLADRFQVKRVAIAIILNSIPLTTSSNGAITITWLLDTSN
LSGRYRLLAPRFAPHLASLCTHKLASLAVLKIINQRVDPMASRILLDELFGADSKVLEEVLGDQMHGIACISKVL
GSTLLEPKDRTTIADRVRAVLVSLRVQSVPAYRKLVEDLGLPFLGPPAQPQPYQQPPSFQYQHHAGAPPASQWSP
YPVYNYPPPNYSVGYAPYPPQQFSQAGPAYPYYTSQHDLATTQRARGNPSPMQGAAPLPYSTSYSPLMPPAGLPN
FGSVPSDPFSFSGNGAFRPQHADSPGGHLRPEAGAFGGYAPGKAFPSVEYRSVVTASPFTPVPVIHINLAP
KEGG Ontology ID : K17974
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd00590 RRM_SF 550-610 N/A
Pfam PF00806 Pumilio-family RNA binding repeat 809-837 GO:0003723
Pfam PF00806 Pumilio-family RNA binding repeat 847-867 GO:0003723
SMART SM00025 pum_5 876-910 GO:0003723
SMART SM00025 pum_5 986-1021 GO:0003723
SUPERFAMILY SSF54928 RNA-binding domain, RBD 410-487 GO:0003676
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_03_239,3.30.70.330-FF-000842,535-621 FunMod -1.17946 Putative RRM (RNA recognition motif) domain-containing protein LAN_03_239,3.30.70.330-FF-000842,535-621
LAN_03_239,PF00076,436-488 FunMod -1.73552 Putative RRM (RNA recognition motif) domain-containing protein LAN_03_239,PF00076,436-488
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_03_239,3.30.70.330-FF-000842,535-621 549,551,554,556,557,558,561,562,578,580,581,582,583,584,585,587,604,605,610,611
LAN_03_239,PF00076,436-488 439,440,441,442,443,444,445,447,451,454,460,461,462,463,464,465,466,467,469,470,471,473,475,479,483,486

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