Glaciozyma antarctica protein structure database

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Protein ID : LAN_03_108
Category : putative
Original description : Putative replication factor A protein
Sequence : MHDQIEDDPIAVEPIVQVLSVKKVSNTNGVDRYRLIVSDGVHFMQAMLATQLNDLVQGDPPAIEKNSVIKLVTYA
CNVIQGRRIIIGLTVDPVSGPVAKIGAQVADVTGGAAAAAAAAAAPAAAVAAVPAGRGGSNASSTSAATKKAPPP
KKSGGAPIYPIEGLSPYQNKWTIKARVTTKSEIKHWSNAKGDGKLFNVNLLDDTGEIKATGFNEACDNLYSIFEE
GKVYYISKARVNIAKKQFSNLTNEYEIMFENSTEVSLCEDQESAPQVKYNFIEIGNLAEQEKDSTCDVLGIVKDN
GELSEITAKATQKQIKKRELTVCDRSGFSVRVTLWGRSAETWEATDGAVYAFKGAKVGDFGGRTLSMGGQSTMTA
DPDIPEAHALRGWYDTEGQTTAFQSFSNAGGMSNQPFKKDEFKTLEQVKTEELGMSDNEKPDYFSVRATIMFVKN
EGMWYPACPSDKCNKKVTMEDTDAWRCEKCDMVYPAPEYRYVLSLSVADHTNQIWLSGFNEIGVLLLSQTADSLE
ALKNEDEAAFQAHVKSVSGKMFNFGCRGKTESYNDQKKVRYQCLKASPVEWVVGARELLEEIEKYEA
KEGG Ontology ID : K07466
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length : N/A
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
CDD cd04477 RPA1N 1-86 GO:0003677, GO:0005634, GO:0006260
Pfam PF01336 OB-fold nucleic acid binding domain 171-254 GO:0003676
Pfam PF16900 Replication protein A OB domain 279-375 N/A
Pfam PF08646 Replication factor-A C terminal domain 438-580 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_03_108,2.40.50.140-FF-000041,157-265 FunMod -0.67935 Putative replication factor A protein LAN_03_108,2.40.50.140-FF-000041,157-265
LAN_03_108,2.40.50.140-FF-000064,268-400 FunMod -1.70608 Putative replication factor A protein LAN_03_108,2.40.50.140-FF-000064,268-400
LAN_03_108,2.40.50.140-FF-000090,400-590 AlphaFold2 90.36 Putative replication factor A protein LAN_03_108,2.40.50.140-FF-000090,400-590
LAN_03_108,PF04057,10-88 FunMod -0.02773 Putative replication factor A protein LAN_03_108,PF04057,10-88
Ligand binding site information : N/A
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_03_108,2.40.50.140-FF-000041,157-265 158,159,160,162,163,165,166,167,168,169,170,172,237,238
LAN_03_108,2.40.50.140-FF-000064,268-400 271,274,276,294,325,347,374,375,376,378,379,380,381,383,384,386,387,388,391
LAN_03_108,PF04057,10-88 12,19,34,36,38,40,41,42,43,44,45,46,47,49,72,73,74,75,76,77,78,79,80,81,82,83,84,85

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