Glaciozyma antarctica protein structure database

Home Browse Download Contact
Protein ID : LAN_02_179
Category : putative
Original description : Putative WD repeat-containing protein
Sequence : MQDDPKKVVTWPHAEGLARLAFSPDGLYLYTSGSEGYMRVFDADVSNTEAPFDPKLIEYWEEPITCISVTNEFIC
SSNESGEVALHKAGSNEFASLVTRCSFPVRSARFDPKGRRIAVASDELIVKVVDARDPLKVQLLAGHKKAVREVT
WSPDGSLLTTSGSDGQIRVWELNGAEATCIQVLDGIIAAAEPESEYTVEVVWHPSSKFFVVASKTNELVVISRDN
WSKLAPFSAPDGHSSQISALAFSPNGSYLATAAREGTIIIWSTASRTPINRTNHAAGLITALAFHPSASANALAY
TDFTGQLTRWQEPVPANLPGPGVGIRGRSESVVEEKEESEFGEEDWIDDEMGVGIDEGTYAGEKLPERLRGWDGE
EYVSTPAYGKVQTQTPFQPGSTPFRDKRRYLSFNMLGLIHVVERDDQNIITIEFHDRSSRTGSHFNDTFKFTLGS
LGELGCIFASPSSSVSPSLIHYRPYDSWTPIQEWQYPLPAGESATVIAVGGMAEPTDIDEIGIAGTGTAIVATDR
GFVRFLSGSGLQKYVWNLGEEVVCAAAGRDWGMVVWALGAGLEFALVDTDTFEVVQEGRMPLGKGARLLWIGFTE
EQIPVMYDSNGLLSILDRSRRPKQARWVPALDTNGLARRQGKQESYWPIGVTEQHVHVIILKGEEKYPHFPTPLF
QEIDLQFPLLRLDVQQGQLEEQYLRETIFVSHRRDGASPDDFSLKALLARQEMETDKHLLKIIQTSCKAERLQAA
LDASTPPPPSTARNGKVANPFATSFSPRASGGVFGSARKGASTMARREEGSDGVEGMEMMDEMEVDGEEVEEVEE
WRDEEEGEERASKRSRSGSEEQSEMSPPPAAAPKKAANPFAKRPLPAKVEAFPSSPNPFPKKGAAKALDLQRTDS
FFGRVEGKAAPKSKSKPRSSTTGPSATPTTVPGSRQTTLFGLAPGIAKPVEKKGGKKRKVAEEEEEVKNGLDAFS
KPGGAKELPREGEEFEETQVKTQVETQVETQDETQAETQEESAQTPVVVAPAPAVDGLSKLEKFRRVQAATPVVA
ESD
KEGG Ontology ID : K11274
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Pfam PF12341 Minichromosome loss protein, Mcl1, middle region 391-684 N/A
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 158-172 N/A
SMART SM00320 WD40_4 4-42 GO:0005515
SMART SM00320 WD40_4 90-129 GO:0005515
SMART SM00320 WD40_4 176-222 GO:0005515
SMART SM00320 WD40_4 225-267 GO:0005515
SMART SM00320 WD40_4 270-311 GO:0005515
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_02_179,PF00400,139-170 AlphaFold2 82.9 Putative WD repeat-containing protein LAN_02_179,PF00400,139-170
LAN_02_179,PF12341,391-684 AlphaFold2 92.87 Putative WD repeat-containing protein LAN_02_179,PF12341,391-684
LAN_02_179,PF12894,202-289 FunMod -0.64001 Putative WD repeat-containing protein LAN_02_179,PF12894,202-289
Ligand binding site information :
Structure ID Residues
LAN_02_179,PF12341,391-684 109,160,161,162,163,164,17,19,20,205,206,207,208,209,21,210,212,259,260,261,4,60,61,62,63
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_02_179,PF00400,139-170 1,4,8,10,11,12,13,14,15,16,17,18,19,20,21,29,30,31,32
LAN_02_179,PF12341,391-684 63,89,90,91,112,113,115,116,117,118,119,120,121,122,123,124,125,126,144
LAN_02_179,PF12894,202-289 202,203,204,205,206,208,209,211,212,223,243,244,245,246,247,248,249,250,251,252,253,263,265,274,277,284,285,286,287,288,289

Footer