Glaciozyma antarctica protein structure database

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Protein ID : LAN_01_075
Category : putative
Original description : Putative ribonuclease II (RNB) family protein
Sequence : MSSPTTLNSTDTPKDLKKPATTTTPPSPSTAPARPSSTGAAPNSSKRSTSRNKDAAKSKPNAPEKKGGHERKGSA
RGGGRRGSHGAATAPEREGAATPPSQSGPSEGLDNLKNIIASLKDGSPTSTSSPPSSSPNRTRNHPAQQHRKNAS
GSSSNPTINAPPCSSAGPSTLNPKAGGFLPNTLGPISDMMDEGLITPTASGFDLMTGRPMPGGGVGGFRGQGFTD
FSTLGAGELPEEIPGFGGVAGLNSRAFAFPQTPQSIAQQQLFLQQQQQQQQQFQQQQLAAMGFGDAAGPRFQQPP
IGGGSNATELMAEQMAIQQQLENLRIQQKNLLARFGEMSTGGAPASSQEQSPSQGHRRIQSQQVGGMMGSFGQGG
MGNFGAQSPPSLPKGHGRRHSVNTVKSTSGHSASSSLSGMNAFAGNGGPAPPAGFGLGPGFQFPNNGAAGGQQQQ
ENDFGPPPTRHFGHTRNTSGSMSSMNGGWSMNNNSHHNNGQANLAEAQSHLQQLGAYRASAGHSRVPSFGMSGLG
GGSGQLAMAGYGGGITPQGQGQQVRKSLFAPYLPQASIPPLLAAGKLVIGVLRVNKRNRSDAYVATDVLDADIYI
CGSKDRNRALEGDVVAIELLDVDEVWGTKKEKEEKKRKKEENASYDPRATRDIRKQDKKKDDVEVEGQGLMLFEE
EEVNDDQKPQFAGHVVAVVERAPGQLFSGMLGVLRPSSAATQQKQDAERREREGVDLRGHAPQQAPRIIWFRPTD
KRVPLIAIPTEQAPHDFIDRPDIYADRLFVACIKRWPITSLHPFGTLVEELGPIGDIETETNALLKDCNFSAEEF
SESVVKCLPPSPWEIPERETSSEVRRDFRQHRVFTIDPETAKDLDDALHVVKNEDGTFEVGVHIADVTHFVKPNT
ALDREARKRATTVYLVQRAVPMLPQTLSEELCSLNPGQDKLTFSVVFTMTAEGRVVSTWFGKTIINSAVKLAYSD
AQAVIDGGSIPDVKIGEGQHRDDVEADILSLASIARQLRARRFENGALTIDNVKVTFGLDDEGFPDDCGTFIRKE
ANELIEEFMLLANISVAGKIAAGLPDQALLRRHEPPIDRRLDAFIDRMKRLDISLDGSSAGALMKSVNLITDPNS
RITLQHLSTKSMQRAKYFCTGMLDIAKYEHYALNLPLYTHFTSPIRRYADIMVHRQLEAVLLGAGDVRFSLDTEA
VSKVAQTCNVKKDAARLAQEQSAHLFLCVLISDLTQRYGPVVRPATVIGVLDEAFDVLVTEFGIEKRVHVDQMPT
ENHVYDEHTNSLQLYWKQGVDVLRWLAENQNDAHLQRVRHQADHHARLMESTSGSAQAESALFDDDEVEDGSSPK
VAGPDKSAQHAKSQDRTAPKFEEVEKTSAGHHVQTIRELQTVPVLITADMSKSPPVIKVVSLNPFV
KEGG Ontology ID : K18748
Disordered region length :
Disordered region residues : N/A
Disordered binding region residues length :
Disordered binding region residues : N/A
Domain information :
Database Database ID Domain description Range covered Gene ontology
Gene3D 2.40.50.690 G3DSA:2.40.50.690 543-646 N/A
Gene3D 2.40.50.700 G3DSA:2.40.50.700 731-806 N/A
Gene3D 2.40.50.140 Nucleic acid-binding proteins 1243-1317 N/A
ProSitePatterns PS01175 Ribonuclease II family signature. 1155-1179 N/A
Structure information :
Structure ID Modelling platform Score (NDOPE/pLDDT) Molprobity score Current description Structure file
LAN_01_075,2.40.50.690-FF-000001,542-646 ColabFold 91.6 2.142 Cell wall biogenesis protein LAN_01_075,2.40.50.690-FF-000001,542-646
LAN_01_075,2.40.50.700-FF-000002,727-806 FunMod -0.69226 2.608 Cell wall biogenesis protein LAN_01_075,2.40.50.700-FF-000002,727-806
LAN_01_075,PF00773,850-1186 FunMod -0.76627 2.341 RNB domain LAN_01_075,PF00773,850-1186
LAN_01_075,PF17877,1239-1323 FunMod -0.16422 2.488 DIS3-like exonuclease 2 C terminal LAN_01_075,PF17877,1239-1323
Ligand binding site information :
Structure ID Residues
LAN_01_075,PF00773,850-1186 1023,1025,1026,1055,1056,1059,1060,1063,1081,1083,1137,1138,1139,1140,1155,1157,1158,1163,1165,1167,1168,1171,1172,862,863
,868,870,871,973
Protein-protein interaction site information :
Structure ID Protein-protein interaction site residues
LAN_01_075,2.40.50.690-FF-000001,542-646 6,8,9,11,12,13,14,15,16,17,33,38,44,62,63,65,66,67,69,72,73,74,75,76
LAN_01_075,2.40.50.700-FF-000002,727-806 741,743,745,751,752,753,754,755,757,759,783,784,785,786,787,788,789,790,791,792,794
LAN_01_075,PF00773,850-1186 914,915,916,917,918,920,1028,1029,1030,1031,1032,1033,1034,1035,1039,1040,1041,1042,1043,1044,1045,1046,1047
LAN_01_075,PF17877,1239-1323 1241,1242,1243,1244,1246,1248,1256,1258,1260,1261,1262,1263,1264,1265,1266,1267,1272,1310,1312,1314,1316,1317,1319,1320

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